Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1904 ATGGAAAATAAGAAGATGCCTCTCTCCCTTGATGTTAAGGATGTTGTGATTGTTAAACCATCCAAGCCTACACCTTGTCATATTCTCCCACTTTCCTCCATTGACAGCAACCCTGATCTCAACATTCTCTGCCACACCATTTATGTGTACCAGGCAAATCCTGATTCCCCAAATGGCCAACTAGACCCTGCTCATGTGATCAAAGAAGCCCTCTCAAAGGCTTTGGTTCACTATTATCCCCTTGCAGGGAAGATAACAGCACTTGATGATGGAAAACTTGGAATAACATGCAATGCCGATGATGATGGAGTACCATTCTTGGAAGCAACTGCTAACTGTAACCTCTCTTCTCTTCACTATCTTGAAGGGATTGATGTTCCAACAGCACAGAAATTTGTGTATGATAACCCTTCAAAAGACCAAACTAGTGAACATCTCTTGGTTTTCAAGGTGACCAAGTTCCAATGTGGGGGTTTCACAGTTGGAATGGGCTTGTCCCACACCGTTTGTGATGGGTTTGGTGCATCTCAGTTCTACAGAGCCCTGTCTGAACTTGCAAGTGGAAAAAAATGTGAGCCTTCACTGAAACCTGTGTGGGAAAGAGAGAGACTAATTGGGACAGTTCTTAAGGAACCTCTCCAATTTCCCATTGATAAAGCTTCAATGGCAGCTTCACCATTTTGGCCAACTACTGAGATTTCTCATGAATGCTTCAACCTTAATGGTGAGAGCATTCAAAGACTCAAATTGGAACTGATGAAGGAAAGTGAGAGTGAAAGTGTGAAGGAAAGCTTCACAACTCTTGAAACACTTGGTGCCTATGTTTGGAGGTCAAGGGCTAGAGCTTTGAAACTGAACACTGATGGGGAAACTCTGTTTTGTTTAGCAGTGGGGGTGAGACACCTATTGGATCCACCTTTGCCTGAAGGGTATTATGGGAATGCTTTTGTGGCTTCAAATGTGGTGCTAACAGTGAAAGAACTTGATGAAAAGCCACTGTCAGAGGTCCTGAAGCTCATCAAAGAGAGTAAGAAGCTTCCTTCTAATAAGGAATACATAAAAAACTCAGTCAACATGTTGGAGACAATGAGGAAATTGGGGATTAGGGTTCAAGCAACAGGTGCATCAGTGGTATTGACAGATTGGAGGCAACTGGGTTTGTTGGAAGAAGTGGATTTTGGATGGAAGGGTTCAGTGAATATAGTGCCAGTTCCATGGAACATGTTTGGATTTGTGGATTTGTGCCTTTTCTTGCCTCCTAGTAAGTTGGATCATTCAATGAAAGGAGGGGTTAGGGTCTTTGTGTCCCTCCCCAAAGCATCCATGCCCAAGTTTAAGGAGGAAATGGAGGCCCTCAAGGAAAGTGATGAGGGTATCATCTAG 1383 0.4346 MENKKMPLSLDVKDVVIVKPSKPTPCHILPLSSIDSNPDLNILCHTIYVYQANPDSPNGQLDPAHVIKEALSKALVHYYPLAGKITALDDGKLGITCNADDDGVPFLEATANCNLSSLHYLEGIDVPTAQKFVYDNPSKDQTSEHLLVFKVTKFQCGGFTVGMGLSHTVCDGFGASQFYRALSELASGKKCEPSLKPVWERERLIGTVLKEPLQFPIDKASMAASPFWPTTEISHECFNLNGESIQRLKLELMKESESESVKESFTTLETLGAYVWRSRARALKLNTDGETLFCLAVGVRHLLDPPLPEGYYGNAFVASNVVLTVKELDEKPLSEVLKLIKESKKLPSNKEYIKNSVNMLETMRKLGIRVQATGASVVLTDWRQLGLLEEVDFGWKGSVNIVPVPWNMFGFVDLCLFLPPSKLDHSMKGGVRVFVSLPKASMPKFKEEMEALKESDEGII* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1904 460 Gene3D - 6 212 IPR023213 -
Lja2g1904 460 Gene3D - 229 449 IPR023213 -
Lja2g1904 460 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 4 453 - -
Lja2g1904 460 Pfam Transferase family 11 451 - -
Lja2g1904 460 PANTHER ACYL TRANSFERASE 4 4 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1904 Lja-Chr2 19794147 19795738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1904 8 412 Monolignol Biosynthesis Gene Families AT5G48930 28.571 2.70e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1904 K20240 - gmx:100801843 714.916