Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1902 ATGCCTTCTACTACTCTTAAATGGCTAAGCCTTGTGCCCATTATTTGGCTCCAAGCCATAAATGGGACAAACACCGATTTCCCTGCTTACTCTTCCCAGTTGAAGGAGCTTCTTTCTATTTCCCAAGTGCATCTCAATAACCTTTCTTTTGCCTCTGATGCAGGGAAACTTTTTGGCTGGTTTTCTGGCCTTGCTTCTCTTTACCTACCTCTCTGGCTTGTCCTCGTAATCGGTTCGATTCTCGGATTAATCGGCTATGGAGTGCAATATCTCTTCATAACAAACCACATTGCCTCTCTATCATATTGGCATGTTTTCTTGCTAACTTTTCTGGCTGGAAATAGCATTTGTTGGATCAACACAGTTTGCTTTGTTGTTGCCATAAGAAACTTTCAATCTGATAGTCAAGTTGCTGTGGGGTTAACAAGCAGTTACCAAGGACTAAGTGCAAAGATTTATACCAATATTGTTGAAGCTGTTTCTCCACACAAAAAAGCTAGAACCTTTCTCTTCCTGAACTCTCTCATACCAGTGGTATTTAGCCTAATAGCAGCTCCTTTTGTCAGAGAAATTGAATCCACAAGTTCCAAGAACACAAGTGTTGGGTTTGCTGTTATGTTTGTTATCACAATTGGCACTGGAATATATGCTGTGATGAGCAGCTTGCAATTTGTCACAAGCAAAACTTCCTCACTTGGAATCCTGATTGGTCTTGTAGTGTCCCTTCTCTTGCTTCTACTAGTCCCAGTTTCTGTGAAGATGAAGGAACTAGCAGGGTCATGTCACAAAAATTGGGAAAGACTTGGAGTCTACTATTTTACTATGGAGGAGGGTACTAATGGAGAGAGGGTGAAAGAGGGTGAACATAGAATAGAAGTTTCAGAGGTTGGTGTTATGGAGGAAATTGGAGTGAAATTAATGCTCAGAAGAGTAAATTTCTGGTTATATTTCTTTGTCTATCTTTTTGGAGCAACAATTGGTTTAGTTTTTCTTAATAACTTGGGACAAATAGCTGAATCCAGGGGTTGCTCTGCCACTTCATCTTTGGTGTCTCTATCTTCATCTTTTGGGTTCTTCGGCCGTCTCATACCGTCTCTCATGGATTACTTCTATAGGGGGAAACATAAAATTTCAAGACCTGCCTCAATGGTGGTTGCGATGGCTCCAATATCAATTGCATTCTTCTTACTACTCAACAAAACAGACATTGCTCTATACACCAGCACTGCAGTGATTGGCGTGTGCACTGGAGCAATTACTTCCATAGCTGTTTCCACAACAACTGAGTTATTTGGAACCAAACATTTCTCAGTGAACCATAATGTGGTCGTGGCCAACATCCCCATTGGTTCTTTTCTATTTGGCTACTCAGCTGCACTTCTTTACCATAAGGAAGGGCATGAACATGTGAAATGCGTAGGCATGAAGTGCTACAATCACACTTTTCTCATCTGGGGCTCCGTTAGCTTGCTTGGAACTGTCTTGGCTTTGATTCTTCATGCTAGGACTCGCAAATTTTATTCACAGAAATAA 1533 0.4116 MPSTTLKWLSLVPIIWLQAINGTNTDFPAYSSQLKELLSISQVHLNNLSFASDAGKLFGWFSGLASLYLPLWLVLVIGSILGLIGYGVQYLFITNHIASLSYWHVFLLTFLAGNSICWINTVCFVVAIRNFQSDSQVAVGLTSSYQGLSAKIYTNIVEAVSPHKKARTFLFLNSLIPVVFSLIAAPFVREIESTSSKNTSVGFAVMFVITIGTGIYAVMSSLQFVTSKTSSLGILIGLVVSLLLLLLVPVSVKMKELAGSCHKNWERLGVYYFTMEEGTNGERVKEGEHRIEVSEVGVMEEIGVKLMLRRVNFWLYFFVYLFGATIGLVFLNNLGQIAESRGCSATSSLVSLSSSFGFFGRLIPSLMDYFYRGKHKISRPASMVVAMAPISIAFFLLLNKTDIALYTSTAVIGVCTGAITSIAVSTTTELFGTKHFSVNHNVVVANIPIGSFLFGYSAALLYHKEGHEHVKCVGMKCYNHTFLIWGSVSLLGTVLALILHARTRKFYSQK* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1902 510 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 510 - -
Lja2g1902 510 Pfam Nodulin-like 7 252 IPR010658 -
Lja2g1902 510 Gene3D MFS general substrate transporter like domains 306 506 IPR036259 -
Lja2g1902 510 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 510 - -
Lja2g1902 510 SUPERFAMILY MFS general substrate transporter 31 505 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1902 Lja-Chr2 19767956 19769967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1902 1 510 Nodulin-like Gene Family AT2G30300 48.956 4.64e-151 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1902 - - gmx:100800763 744.962