Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1865 ATGAAGAGCTTTGCCTACTTTGGTAGAAAGCTAGATCATTTTTGTAGTGTTTTCCACAAATTCTTTTGTAGTTTCCATGCTTTCCTCATTCAACTTTGCTATTTCATTACCCTCTCTTTGTTTGGTTACCTGTGTCTCAAGGTCTCTAAGCCAAGGTCCCCTGTCAGCCACAATGACATTGATCTATTTTTCACCTCTGTTTCTGCTGCCACAGTTTCTAGTATGACAGCAATAGAAATGGAGGTTTTTTCCAATTCCCAACTCATTCTCCTCACCTTTCTCATGTTACTGGGTGGTGAAGTTTTTACTTCCATGCTTGAACTTGTACTTGCCAGGTTCAACTTCACAAAAAATCATAGTACTACTGTTCAATTGAAACAGGATCCCCCACCTAAGTCCAATCAAATTGAGATTGGTTTAGTTTCTGTTTCTAATTCAGAAAGCCATAAACAGAATCATAGTATTCTTTTTGTTCCAAATGACATGGTTGAGTCCTTTAACTATAATGAAAGACTTAAGTATAACTCTCTTAAGTGTCTGAGTCATGTCGTTTTTGGTTACCTTACTGTGATTCATATTGTTGGTGTTTGTTTGGTCTCTATGTACACAGCATTTATACCAAGTGCAAGACAAGTACTTGAAAACAAAGATATCAAAATACCAACATTTTCTTTCTTCATCATAGTTTCCACTTTTGCTAGTTGTGGTTTTGTCCCTACCAATGAGAACATGGTAGTTTTCAAGAAGAATTCAGGCCTCCTCCTTCTTATTCTTCCACATGTTCTTCTTGGTAACGCCCTTTACGCACCATGTTTGAGGCTTGTCATAATGCTTATGAAAAAAGTTACCAGAAGAGAGGAACTCTCTTACTTGCTGAAGAATTCCAAAGAGATGGGTTCTAGCCATATGCTCCCTGCTCTTCATTGCTGGCTCCTGATTGTTACTGTTTTTGGGTTCAATCTGGTACAATTGATAATGTTCTGCTCCATGGAGTGGAATTCCAAAAATATGGAGGGTTTAAGTCTCTATCAGAAACTGGTTGCTTCTTTGTTTCAAGTTACAAATGCTAGACATGCTGGTGAATCTGTTTTTGATCTCTCCACCATCTCTTCAGCCATATTGGTGCTCTTCGTTGTCATGATGTACCTTCCACCATACACAACATTTTTACCTGTAAGGGGCCATGAAAATGATGTCAAGAGAGAAGAAAAGAGCTTAGTGGAGTGTCTTGTATTCTCTCAAATCTCTTACTTGGTTATTTTCATTATTCTGATTTGCATCACAGAGAGAGAAAGCTTGACAGAGGATCCCCTCAACTTTAATGTGTTGAACATCACCTTAGAAGTCATCAGTGCATATGGAAACGTAGGATTCTCAACAGGATATAGCTGCGCAAGGCAATTGAAACCAGATGCTATGTGTAAAGATTTATGGGTTGGATTTTCGGGTAAGTGGAGTACAAAAGGCAAGTTCATCCTTATCTTGGTCATGTTCTTTGGGAGGCTCAAGAAATTCAATATGAATGGAGGCAAAGCTTGGCACCTGTCCTAG 1551 0.3868 MKSFAYFGRKLDHFCSVFHKFFCSFHAFLIQLCYFITLSLFGYLCLKVSKPRSPVSHNDIDLFFTSVSAATVSSMTAIEMEVFSNSQLILLTFLMLLGGEVFTSMLELVLARFNFTKNHSTTVQLKQDPPPKSNQIEIGLVSVSNSESHKQNHSILFVPNDMVESFNYNERLKYNSLKCLSHVVFGYLTVIHIVGVCLVSMYTAFIPSARQVLENKDIKIPTFSFFIIVSTFASCGFVPTNENMVVFKKNSGLLLLILPHVLLGNALYAPCLRLVIMLMKKVTRREELSYLLKNSKEMGSSHMLPALHCWLLIVTVFGFNLVQLIMFCSMEWNSKNMEGLSLYQKLVASLFQVTNARHAGESVFDLSTISSAILVLFVVMMYLPPYTTFLPVRGHENDVKREEKSLVECLVFSQISYLVIFIILICITERESLTEDPLNFNVLNITLEVISAYGNVGFSTGYSCARQLKPDAMCKDLWVGFSGKWSTKGKFILILVMFFGRLKKFNMNGGKAWHLS* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1865 516 Pfam Cation transport protein 171 383 IPR003445 GO:0006812|GO:0008324|GO:0055085
Lja2g1865 516 Pfam Cation transport protein 414 503 IPR003445 GO:0006812|GO:0008324|GO:0055085
Lja2g1865 516 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 1 516 - -
Lja2g1865 516 PANTHER SODIUM TRANSPORTER HKT1 1 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1865 Lja-Chr2 19304516 19317041 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1865 47 515 Inorganic Solute Cotransporters AT4G10310 50.417 6.55e-157 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1865 K24976 - gmx:100797835 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1865 2 19304516 19317041 Lja2g1865 2 19304516 19317041 ECH