Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1864 ATGAAGACACTCACTAGTTTTATAAAAATGTTACAAGATATTTGTAGCGCTTCATGTCAAAAAGCCGCCAGTATTAGCAAATCAGGTTCCTCCTTAATGGCATGCTGTGGTCGCTTCATCCTCCGCAGTTCACCAAATCCTCTATGGGTTCAAATTTTCTACTTCACCTCTCTCTCGTTAATGGGGTACGGAGTTCTCAAGGCTCTGCACCCCAGAAAAACAGGGTCAGATTTCACTCCTACTAGCTTAGACATTTTCTTCACCTCTGTTTCAGCCACCACAGTTTCAAGCATGTCCACGGTTGAAATGGAGGTTTTTTCCAACTCCCAATTGATCATGATGACCATTTTAATGTTCATAGGTGGTGAGATTTTCACCTCAATGGTGGGTCTCTGTTTCTTTAGGTTCAAGCTCAAAACAGAGCTTCATAAACTTGCTGCTTCTCATAGCCGTCTCAGTTGTCCAAATCAAATGATTTTGGACCAAGTTGAACTAGGTGGTATGGTCACAATCACAAACACTAACTCAGATAGTTCTCATTCTCTACCTAAATTCAATGAGATTGAACACGAATCTCATGATTATTTGAGTGCCTCAAATAAAAACTTGAGGTACTTATCTATGAAATGCTTGGGTTTTGTAGTTCTAGCTTATCTTCTAGTTGTCCAATTGATAGGGGTTATTGGAATTTCCCTTTACCTGGATTTAATTCACAGTGCTAAAGAGGTGATACAGAAAAAGGGGTTAAACAAGGTCACATTCTCTGTTTTCACTGTAGTTTCAACTTTTGCTAGCTGTGGTTTTGTTCCAACAAATGAAAACATGGTTGTTTTTGGGAAGAATTCAGGTCTTCTTCTCATGCTGATTCCTCAGATTCTTCTTGGCAATACCCTTTTCCCTCCTTGCTTGAGATTTGGGATCTGGGTTCTGGGGAAATTTCATAAGAAGAAAGAGTGTGAGTACCTTCTGAAAAATAGTACACAGGAGGTTGGGTACAAACACTTGCTTCCAAAACAGCACTCTGTATTTTTGGTGGGCACTGTTTTTGGGTTTATTGTGGTTCAAGTTTTGGTTTTTTGTTTGATGGATTGGGATTCAGAAGGTTTGAAGGGGATGAATGAGTACCAGAAATTCATTGGAGTGTTGTTTCAGAGTGTGAATTCCAGACACACAGGGGAAACCATTGTGGACATCTCAATCCTTTCCCAGGCCATCTTGGTGCTGTTTGTGGTGATGATGTACCTTCCTCCTTACACCTCTTTCATTCCAATGAAAGATGGTATGCAAGACTCAGATGAGAAGATTCAAAAAAGAAGAGGAAAAGTTGTAGAGAACTTGATATTCTCTCAACTCTCCTATTTAGTCATATTCATCATCCTCGTGTGCATAACTGAGAGGAAAAAATTGAAGGAGGATCCTCTCAATTTCAACGTCTTGAACATTGTCGTTGAAGTCGTCAGGTTAGGTTTCTTTCAATTTGTTCCAGTTCCAACCTTCCCCATTCCATTCAAATTTTGGCGAACTCAATTTTTTGATTAA 1539 0.3964 MKTLTSFIKMLQDICSASCQKAASISKSGSSLMACCGRFILRSSPNPLWVQIFYFTSLSLMGYGVLKALHPRKTGSDFTPTSLDIFFTSVSATTVSSMSTVEMEVFSNSQLIMMTILMFIGGEIFTSMVGLCFFRFKLKTELHKLAASHSRLSCPNQMILDQVELGGMVTITNTNSDSSHSLPKFNEIEHESHDYLSASNKNLRYLSMKCLGFVVLAYLLVVQLIGVIGISLYLDLIHSAKEVIQKKGLNKVTFSVFTVVSTFASCGFVPTNENMVVFGKNSGLLLMLIPQILLGNTLFPPCLRFGIWVLGKFHKKKECEYLLKNSTQEVGYKHLLPKQHSVFLVGTVFGFIVVQVLVFCLMDWDSEGLKGMNEYQKFIGVLFQSVNSRHTGETIVDISILSQAILVLFVVMMYLPPYTSFIPMKDGMQDSDEKIQKRRGKVVENLIFSQLSYLVIFIILVCITERKKLKEDPLNFNVLNIVVEVVRLGFFQFVPVPTFPIPFKFWRTQFFD* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1864 512 PANTHER SODIUM TRANSPORTER HKT1 28 486 - -
Lja2g1864 512 Pfam Cation transport protein 165 486 IPR003445 GO:0006812|GO:0008324|GO:0055085
Lja2g1864 512 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 28 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1864 Lja-Chr2 19289055 19293705 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1864 67 486 Inorganic Solute Cotransporters AT4G10310 47.917 3.17e-119 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1864 K24976 - lja:Lj2g3v0914260.1 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1864 2 19289055 19293705 Lja2g1864 2 19289055 19293705 ECH