Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1862 ATGGCTTCCCGCTTGACTTATATCCAGGCCAAAGCTGTTCTTCAATTACACCCAAGGATGATAAATTTTGCCTACTTTGGCAGAAAGCTTGAGCCTTTTTGCAGTTCTTTCCTGCACAACTTCAACTTCCATGCATCCTTGGCTCGTTTCTTATCCTTTCAATTCAACCCTTTCTTTGTCCAACTTTGCTATTTCTTGATCCTTTCTCTGTTTGGTTACATGGGCCTCAAGGTCTCAAACCCAAGGTCCCCTGTTAGGCTCAATGACCTTGATCTGTTTTACACCTCTGTTTCTGCTTCCACAGTGTCTAGCATGTCAGCCTTAGAAATGGAGGTTTTCTCCAATTCGCAGCTCATTATTCTCACCTTTCTCATGTTACTTGGTGGGGAAGTTTTTATTTCCTTTCTCCAACTCGTGTTTACAAGGTTCAAATATAGCACCACTCTTTCAATGAAACAAGATTCCTCATTTAAGGCCAATCAAATTGAGCTTGGTTTAGTTTCTGTTTCTCACTCAGAAAACCATAAACCCAATCAAGTTGAGTCCTTCAACGATAGAGAGAGACTTAAGTATAATTCTCTTAAGTGTTTGAGTCATGTTGTGTTGAGTTACCTTATTGTGGTTCATTTTGTTGGTGTTGGTTTGGTCTCTTTGTACATATTGTTGATACCAAGTGTGAGACAAGTACTAGAAAAAAAAGGCATCAAATTGCAAACATTTTCTTTCTTCACCATAGTTTCCACTTTTGCCAATTGTGGTTTTGTTCCAACCAATGAAAACATGGTTGTTTTCAAGAAGAATTCAGGGCTTCTCATCCTTCTCCTCCCACTTGTCTTTCTGGGTAACACCCTTTACCCACCATGTTTGAGGCTTGTCATAAAGCTTCTGAAAAAAGGTACCGGAAGAGAGGAATTCTCGTACTTGCTGAAGAATTCGAAAGAGATGGGTTATGGCCATTTGCTCTCTGGTCTTCATTGCTGGCTCCTGCTTGTTACTGTTTTTGGGTTCAATATGGTGCAATTTATAATGTTGTGCTCCATGGAGCGGAACTCCAAAAGTATGGAGGGTTTAAATCTATATGGGAAATTGGTTGCTTCTTTGTTTCAAGTTACAAATACGAGACATGCTGGTGAATCTGTTTTTGATCTCTCCACAGTCTCTTCAGCCATATTGGTGCTCTTCATTGTCATGATGTACCTTCCACCATACACTACATTTTTATCTGTAAGGGACCAAGAAAATAATGCCAAGAGAGAAGAAAAAAGCATAGTGGAGTGTCTTGTATTCTCTCAAATCTCTTACTTGGTTATTTTCATCATTCTGATTTGCATCACTGAGAGAGAAAGCTTGAAAGAGGATCCCCTCAACTTTAATGTCCTGAACATCACCCTAGAAGTCATCAGTGCATATGGGAACGTGGGATTCTCAACAGGGTATAGCTGCGCAAGGCAATTGAAACCTGATGCTATGTGCAGAGATTCATGGGTTGGATTTTCTGGTAGGTGGAGCACTAAAGGCAAGTCGATCCTCATCTTTGTCATGTTCTTTGGGAGGCTCAAGCAATTCAATATGAATGGTGGCAAACCCTGGCATCAATCCAAGCATATACCTAACAGCACAAATGCTTCGCAAACATGA 1638 0.4048 MASRLTYIQAKAVLQLHPRMINFAYFGRKLEPFCSSFLHNFNFHASLARFLSFQFNPFFVQLCYFLILSLFGYMGLKVSNPRSPVRLNDLDLFYTSVSASTVSSMSALEMEVFSNSQLIILTFLMLLGGEVFISFLQLVFTRFKYSTTLSMKQDSSFKANQIELGLVSVSHSENHKPNQVESFNDRERLKYNSLKCLSHVVLSYLIVVHFVGVGLVSLYILLIPSVRQVLEKKGIKLQTFSFFTIVSTFANCGFVPTNENMVVFKKNSGLLILLLPLVFLGNTLYPPCLRLVIKLLKKGTGREEFSYLLKNSKEMGYGHLLSGLHCWLLLVTVFGFNMVQFIMLCSMERNSKSMEGLNLYGKLVASLFQVTNTRHAGESVFDLSTVSSAILVLFIVMMYLPPYTTFLSVRDQENNAKREEKSIVECLVFSQISYLVIFIILICITERESLKEDPLNFNVLNITLEVISAYGNVGFSTGYSCARQLKPDAMCRDSWVGFSGRWSTKGKSILIFVMFFGRLKQFNMNGGKPWHQSKHIPNSTNASQT* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1862 545 PANTHER SODIUM TRANSPORTER HKT1 47 531 - -
Lja2g1862 545 Pfam Cation transport protein 186 410 IPR003445 GO:0006812|GO:0008324|GO:0055085
Lja2g1862 545 Pfam Cation transport protein 423 520 IPR003445 GO:0006812|GO:0008324|GO:0055085
Lja2g1862 545 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 47 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1862 Lja-Chr2 19264708 19268493 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1862 77 530 Inorganic Solute Cotransporters AT4G10310 52.532 4.21e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1862 K24976 - gmx:100797835 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1862 2 19264708 19268493 Lja2g1862 2 19264708 19268493 ECH