Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1815 ATGAAGAAAGTGATCACCAATGACTTGCTTTCACCCCTCAGGCATCAATGGCTTCATGACAAGAGGGTCCAAGAAGCTGATAACCTTGTCAGTTTTGTGTACAACCAATGCAGAAATGGTGGTGGACTAGTGAATGTGAGAGTTGCTGCACAACATTATTCTGGGAATGTGATAAGGAGGTTGGTTTTCAATAGAAGGTTCTTTGGAGAGGGTAGGGAAGATGGAGGACCTGGTGTTGAGGAAGTAGAGCATGTAGAAGCACTTTTCACTATGCTGAAGTACCTCTTTGCCTTCTCTATTTCTGATTACATGGCATGCTTCAGGGGACTTGACTTGGATGGTCATAAAGGGAACATAAAGAAGGCTTGTGAGGTTGTGAGAAAATATCATGATCCAATTATTGAAGACAGAATTGAGAAATGGAAGAATGAGAAAAATACAGATCAAGAAGACTTGCTAGATGTTCTCATTTCACTCAAAGGAGCTCACACCAATCCACTTTTGACTGTGGAGGAAATTCGGTCTCAAACTATGGAAATAATGATGGCAACAGTTGATAATCCACCAAATGCACTTGAATGGGGACTTGCAGAATTGATAAATCAGCCTGAGCTACTACGAAAGGCCACTGAGGAATTGGACAATGTGGTAGGTAGAGGAAGGCTAGTGCAAGAATCAGATTTCCCAAAGCTCAACTATGTGAAGGCCTGTGCAAGAGAAGCTTTTCGTCTTCACCCCATTACAGATTTTATCATTCCCCATGTTTCAATGGCTGACACAGTTGTTGCTAATTACTTTATCCCAAAGGGTAGCCATGTGTTGCTAAGGAGACAAGGAATTGGCCACAATCCAAGAGTTTGGGAAGAACCACTCAAGTTCAAACCAGAACGTCATCTTAAGAGTGATGGGTCTAATTTGGTTTTAACAGAGCCAAGCTTGAAGTTGATAACATTCAGCACTGGAAGACGTGGTTGTCCAGGACTCATGCTTGGAACTTCAATGACTCTTATGCTATTTGCAAGGTTGCTTCATGGCTTCACTTGGAGTGTGCCACCTAATCAGTCTAGAATTGATCTCTCTGAATCTGATGGAGATACCACCAAAGCTAAGCCTCTTGTGGCCTTTGCAGAGCCAAGGTTATTGGCAGAGGCTTATCATGTATATTAA 1167 0.4233 MKKVITNDLLSPLRHQWLHDKRVQEADNLVSFVYNQCRNGGGLVNVRVAAQHYSGNVIRRLVFNRRFFGEGREDGGPGVEEVEHVEALFTMLKYLFAFSISDYMACFRGLDLDGHKGNIKKACEVVRKYHDPIIEDRIEKWKNEKNTDQEDLLDVLISLKGAHTNPLLTVEEIRSQTMEIMMATVDNPPNALEWGLAELINQPELLRKATEELDNVVGRGRLVQESDFPKLNYVKACAREAFRLHPITDFIIPHVSMADTVVANYFIPKGSHVLLRRQGIGHNPRVWEEPLKFKPERHLKSDGSNLVLTEPSLKLITFSTGRRGCPGLMLGTSMTLMLFARLLHGFTWSVPPNQSRIDLSESDGDTTKAKPLVAFAEPRLLAEAYHVY* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1815 388 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 318 327 IPR017972 GO:0005506|GO:0016705
Lja2g1815 388 SUPERFAMILY Cytochrome P450 3 379 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1815 388 PRINTS E-class P450 group I signature 235 253 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1815 388 PRINTS E-class P450 group I signature 53 71 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1815 388 PRINTS E-class P450 group I signature 315 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1815 388 PRINTS E-class P450 group I signature 276 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1815 388 PRINTS E-class P450 group I signature 192 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1815 388 PRINTS E-class P450 group I signature 325 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1815 388 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 1 383 - -
Lja2g1815 388 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 383 - -
Lja2g1815 388 Pfam Cytochrome P450 2 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1815 388 Gene3D Cytochrome P450 1 382 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1815 Lja-Chr2 18750736 18752983 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1815 1 385 Cytochrome P450 AT4G39950 53.109 1.57e-150 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1815 - K12153 gmx:100809902 527.709