Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1797 ATGTTAATCTACGCTTGCACCATTGCAGCATTGCTATGCTTCCTCCTACACATCATTCACAGGAGACAACGTTGCAGATACCCGCTCTTGATAGACTATCCAATACTCGGCATGTTCCCACCAATCCTGTTGAACTTAACGTGGATCCACGATTTCGTAACTGAGCTCCTCAAACAACATGAGGGCAAAACAGCAGATTTTATGGGACCCTGGTTCACCAAAATGGACTTCATCGTCACCAGCAACCCCATCAACGTCCGCCACATCACCATCAAGAAATTCCACAACTATGTCAAGGGCCCTGAGTTTCGCGAGATTTTCCACGCTTTTGGAGGCGCTATGGTAGCTAATGATTCAGAGACCTGGAAGCACGCCAGGTCTCTACTCAGTCCTTTGGTTAAGCAAACGAGCTTCGAGTCGTTTTACCAGAAAACGACTCGGAAGAAGTTGCATAGTGCACTGCTTCCCCTGTTGGATCAGGTTCAGAAACAGGGCATGGTGGTGGATTTGCAAGAGGTTTTCAACCGATTCACGTTCGACAACATATGTTCCACCATTCTAGGGTTTGATCCTGGTTCCCTTTCCATTGATTTCCCCAAAATCGCAACCGAGATTGCTTTCAATGAAGCGGAGGAGTGCATGTTCTACAGACATATTGTTCCAAGATGTGTCTGGAAGTTACAAGAATGGCTTCAAATTGGTCCAGAAAAGAAGATGAGTGAAGCATGCAAAACATTTGATCAGTTCCTATACTCATGTATAGAGTCTAAGCGAAAGGAGCTGAAGGAAAATGACCCATTACTTGATGATCAAGCTCATGTTGACAATGACATGCCATTGCTAACAACATTGATTAGAGAAGAGAAAGGGAAGAAAGAATATGATAACAAGTTTATAAGGGACTCTGTATATGGCTTCCTTGAAGGAGGGAGAAGCACCATTGCTTCAGCTCTCACCTGGTTCTTCTGGCTTGTTGCTAAAAATCCATTAGTGGAAGCCAAGATTCTTGAAGAAATCAAAGATAATTTTGGGGATGAGAAAAAGCTAGTTTATCTCCATGCTGATATGTATGAAACTATGAGGCTTTACCCTCCTGTACCTTTTGAGAGGAAACAAGCAATTGAAGCTGATGTGCTTCCAAGTGGGCATCATGTTCATGCCAATGCAATGATACTGTTTTCTCTGTATGCAATGGGGAGGTTTGAAGATGTGTGGGGAGAAGATTGCTTGGAGTTCAAGCCTGAGAGGTGGATTTCTGATAGAGGAGGCATTGTTTATGTGCCATCTTACAAATTCTTTAGTTTTAATGCAGGACCAAGGACTTGTTTGGGAAAGGACATGTCCTTAGTTCAATTAAAGATGGTGGCAGCAACTATTTTGAGAAACTATAGGATCCATCCGGTGGAAGTTCATGTTCCTATCCCGAGCTACTCAATTATACTCCTTATGAAGGATGGCTTTAAGGTTAGGGTAACAAAAAGAGAACCTTGA 1491 0.4306 MLIYACTIAALLCFLLHIIHRRQRCRYPLLIDYPILGMFPPILLNLTWIHDFVTELLKQHEGKTADFMGPWFTKMDFIVTSNPINVRHITIKKFHNYVKGPEFREIFHAFGGAMVANDSETWKHARSLLSPLVKQTSFESFYQKTTRKKLHSALLPLLDQVQKQGMVVDLQEVFNRFTFDNICSTILGFDPGSLSIDFPKIATEIAFNEAEECMFYRHIVPRCVWKLQEWLQIGPEKKMSEACKTFDQFLYSCIESKRKELKENDPLLDDQAHVDNDMPLLTTLIREEKGKKEYDNKFIRDSVYGFLEGGRSTIASALTWFFWLVAKNPLVEAKILEEIKDNFGDEKKLVYLHADMYETMRLYPPVPFERKQAIEADVLPSGHHVHANAMILFSLYAMGRFEDVWGEDCLEFKPERWISDRGGIVYVPSYKFFSFNAGPRTCLGKDMSLVQLKMVAATILRNYRIHPVEVHVPIPSYSIILLMKDGFKVRVTKREP* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1797 496 SUPERFAMILY Cytochrome P450 19 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1797 496 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1797 496 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1797 496 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1797 496 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1797 496 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 493 - -
Lja2g1797 496 PANTHER CYTOCHROME P450 7 493 - -
Lja2g1797 496 Pfam Cytochrome P450 41 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1797 496 Gene3D Cytochrome P450 19 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1797 496 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1797 496 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1797 496 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1797 496 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1797 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1797 Lja-Chr2 18415451 18416941 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1797 10 494 Cytochrome P450 AT4G32170 43.800 2.61e-145 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1797 - - gmx:100780625 645.966