Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1792 ATGGAGTCATCTGTCAGTGGAGTTGATTTCTTATCAGAGGTTCAGAATTCAGTTTCTGCGGCACGTCACAATCCTCCTTCAACATCTGGGACTCCCCGTCCTTCTCGACCTCCATTGAGAGCACCTAGAAATCATGGTCATGGGGCTTCTTCCACTTCTCTTATGGCTGGTCACCATAATTATGGAACAAAGACCATCCATCATCAAAACACCTATGTAGTTCATGGAAAGCATCCCTATCTGGATGGAAACAAAGTGGAATGTGAAGGATTGGCAACAAAATTATTCGGCAAGCAACCATTTGATGATTCCAAGGCTTGTGAGTTAACTGGCATATTAGAATTGGAAAATTGTATCTTAGGTCCATCGAGACGAGCTGTTGTTAATCATGCAAAGAGTTACTGTCAGTCAGAGGTTACTTTCTGTTCAAGTCCTCAGAACAGTTTCTATTCAGCCACCGTCTATTCAGAAGCCAAAGAAAGTTTCACCAATACTGAGGCCAGTGAGTGCGCTAGTGTTGATAAGTCGTGCGAAAGTGGAGAAGTTACAATTTCCTGTGATTTCAATGAGAGCAGGAAGACCAGCACCTGTAGAGCGAGTACTGGAACTGATGATAGCGACGAGAGCAGCATCAGTAGCTTGAGCAGTGCTTTGTACAAACCCCACAAGGCAAATGATGTAAGATGGGAAGCAATTCAAGCCATCCGAGTTCGTGATGGGACGTTGGAAATGAGGCATTTCAAGTTGTTGAAGAAGCTGGGATGCGGAGACATTGGAAGTGTGTATCTAGCAGAACTGAGTGGCACAAGGACTTCTTTTGCCATGAAGGTCATGAACAAAACCGAGCTGGCAGGGCGAAAGAAGCTTCTGAGGACTCAGACGGAGAGAGAGATATTGCAGTCTTTGGATCATCCGTTTCTACCCACATTATATACACACTTTGAGACAGAGTCATTCTCCTGCTTGGTAATGGAGTTCTGCCCTGGTGGTGACCTTCATGCACTCAGGCAAAGACAACCTGGGAAGTTCTTTTCCGAGCATGCTGTCAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTATTTGCACATGCTTGGGATCATCTACAGAGACCTTAAACCTGAGAATGTATTGGTGAGAGAAGATGGTCATATAATGCTCTCAGATTTTGATCTCTCTCTAAGGTGCACCTTCAGTCCAACTCTTGTAAAGTCATCAAACCCTGTCTTGCAAACAAAAAGCTCAGGATTCTGCATTCAGCCCGCATGCATTGATCCATCATGTGCAACGCAACCAGACTGCGTCCAACCTGCATGCTTCTCGCCGCGATTTCTCTCAGGCAGGTCCAAGAGAGAAAAGAAGTTCAGACCAAAGTACGACATGCATCATCAGGTGAGCCCTCTCCCTGAGCTAGTTGCCGAGCCGACAAATGCGCGATCCATGTCATTCGTGGGCACACACGAGTACTTGGCACCAGAAATCATTAAAGGGGAAGGGCACGGGAGCGCTGTAGACTGGTGGACGTTTGGGATATTCCTGTACGAGCTTCTGTTTGGTAGAACTCCATTCAAGGGTTCTGCCAACCGAGCAACGCTGTTTAATGTTGTCGGGCAGCCCTTGAGGTTTCCAGAATCTCCTGCTGTCAGCTTTGCTGCCAGGGACTTGATCAGGGGGTTGCTTGTGAAAGAGCCTCAGCATCGTCTTGCCTATAGACGCGGAGCTACAGAGATTAAACAGCATCCGTTCTTTCACAATGTGAACTGGGCACTTATCCGGTGTACTAATCCTCCTGAGGTTCCAAGACAAACCATGATGAGACCATCCCAAACTGAAAAGGAGCTTGGTGTAAAGCCTTCTGGTAATTATTTAGATATTGATTTCTTTTGA 1890 0.463 MESSVSGVDFLSEVQNSVSAARHNPPSTSGTPRPSRPPLRAPRNHGHGASSTSLMAGHHNYGTKTIHHQNTYVVHGKHPYLDGNKVECEGLATKLFGKQPFDDSKACELTGILELENCILGPSRRAVVNHAKSYCQSEVTFCSSPQNSFYSATVYSEAKESFTNTEASECASVDKSCESGEVTISCDFNESRKTSTCRASTGTDDSDESSISSLSSALYKPHKANDVRWEAIQAIRVRDGTLEMRHFKLLKKLGCGDIGSVYLAELSGTRTSFAMKVMNKTELAGRKKLLRTQTEREILQSLDHPFLPTLYTHFETESFSCLVMEFCPGGDLHALRQRQPGKFFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTFSPTLVKSSNPVLQTKSSGFCIQPACIDPSCATQPDCVQPACFSPRFLSGRSKREKKFRPKYDMHHQVSPLPELVAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPAVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFHNVNWALIRCTNPPEVPRQTMMRPSQTEKELGVKPSGNYLDIDFF* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1792 629 Pfam Protein kinase domain 481 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1792 629 Pfam Protein kinase domain 248 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1792 629 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 96 629 - -
Lja2g1792 629 PANTHER FLIPPASE KINASE 1-RELATED 96 629 - -
Lja2g1792 629 MobiDBLite consensus disorder prediction 1 58 - -
Lja2g1792 629 Gene3D Phosphorylase Kinase; domain 1 245 330 - -
Lja2g1792 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 368 380 IPR008271 GO:0004672|GO:0006468
Lja2g1792 629 Gene3D Transferase(Phosphotransferase) domain 1 331 399 - -
Lja2g1792 629 SMART serkin_6 247 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1792 629 SUPERFAMILY Protein kinase-like (PK-like) 223 609 IPR011009 -
Lja2g1792 629 Gene3D Transferase(Phosphotransferase) domain 1 478 602 - -
Lja2g1792 629 CDD STKc_phototropin_like 245 602 - -
Lja2g1792 629 ProSiteProfiles Protein kinase domain profile. 247 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1792 629 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1792 Lja-Chr2 18365076 18368165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1792 171 629 AGC Kinase Gene Family AT5G47750 71.548 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lja2g1792 Pkinase 3.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1792 K08286 - gmx:100810909 1027.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1792 2 18365076 18368165 Lja2g1792 2 18365076 18368165 ECH