Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1785 ATGAATACGACGCCGTTCATGGACAAGCAGATAATGGATCTCACTCATGGATCTTCTTCTCCTCAGCAGCAATCACACACCAACGACTTCATCGACCTCATGAAGCATCCACAAGAACACGAAGAACAAGAAGAAGAAGAAGAACCACAATTCCAACATCATCACCATCATCATCAGAATCTGAATCATCATCGAGTTGTTGAAGATGAAGGCCGTGGTGGCGGCAATGGAATCAACACCGATGACATCGTTCCCAGCTACGATTTCAAACCGATTCGCCCACTCGCTGCTTCTAATTACGATTCTGCCCCTAATCTCAGTGCCGCATTTTCCAGGCCTTGGAATTCTGATTCCAACCAACCCATCACTAAAAGTTACAGTTCTCTGGATTCTATTGAACCTTTGAAGGTCAATGTAGAAAAGGACCGAAATGCTTTTGATCCTCAAATTTTGTCTGAGATAGATCAGACCGTGAAGAAACATACGGAAAATTTGCTTCATGTTCTGGAAGGTGTTAGTGCACGGTTAACACAACTAGAAACCAGAACACGCCATCTTGAGAATTCTATGGATGATTTGAAGGTATCTGTTGGAAATAATCATGGTAGCACTGATGGAAAATTTAGGCAGCTGGAGAATATTCTTCGAGAGGTGCAATCAGGGGTGCAGACTATCAAGGACAAGCAAGATATAGTGCAGGCTCAGCTGCAATTGGCAAAGCTACAAGTATCCAAGACAGATCAACAATCTGAAACTCAAACTAGTGCAGGTACAGATCCTGTCCAGCAAGCTGCATCTGCTCCCCTGCAATCTCAACAACAGTTTCCTTCCCCTGTTAATCTCCCACAGTCTATTCCTGTGGTTCCTCCCCCTAATGCACCTCCTCAACTGCCCCCCCAACAGGGTTTGCCACCTTCATTTCCACCTCCAAATCAATTCTCTCAGACCCAAATCCCAGCTGTTCCTCAGAGAGATCCATACTTCCCACCACCTGTTCAATCTCAGGAAACCCCAAATCAGCAATACCAACAGCCTTTAGCACCGCAGCCACATCCTCAACCTGGGGCACCTCCGCATCAGCAATATCAGCAGACCCCTCATCCCCAGTATTCTCAGCCAGCACCTCCCCAGCATCAGCCACCAATTCCTTCCATAAACCCGCCTCAACTACAATCTTCACTGGGTCACCATGTAGAGGAACCACCTTATGTTCCTTCTCAGACTTACCCTCCCAATCTCCGCCAGCCACCATCTCAGCCACCTAGTGGACCTCCTGCTCCTCCTTCCCAGCAGTTCTATGGGACAGCACCCCATGCATATGAACCACCACCAAGTAGGTCTGGCTCAGGTTACTCTTCTGGATATGGTTCATCATCCGGGCCGGCTGAGCAATATCGTTATGGTGGACCACCTCAGTATGGTGGTAAACCACCGCAACTACCCACTGCTTCATTGGCTGTAAGTGGTGGAAGTGGTTATCCACAACTCCCAACTGCTCGGGTACTCCCACAAGCTATACCTACAGCTTCTGCAGTAAGTGGTGGTGGTTCAGGTTCTGCTGGAACTGGAAGCAAAGTTTCTATTGATGATGTAGTCGACAAAGTTGCTACTATGGGATTCCCTAGAGATCATGTGAGGGCAACAGTTAGGAAGCTAACAGAGAATGGTCAATCAGTTGATCTAAATGCAGTGCTGGATAAGCTTATGAATGAAGGTGATATGCAGCCAACAAGAGGTTGGTTTGGTCGGTAG 1752 0.4737 MNTTPFMDKQIMDLTHGSSSPQQQSHTNDFIDLMKHPQEHEEQEEEEEPQFQHHHHHHQNLNHHRVVEDEGRGGGNGINTDDIVPSYDFKPIRPLAASNYDSAPNLSAAFSRPWNSDSNQPITKSYSSLDSIEPLKVNVEKDRNAFDPQILSEIDQTVKKHTENLLHVLEGVSARLTQLETRTRHLENSMDDLKVSVGNNHGSTDGKFRQLENILREVQSGVQTIKDKQDIVQAQLQLAKLQVSKTDQQSETQTSAGTDPVQQAASAPLQSQQQFPSPVNLPQSIPVVPPPNAPPQLPPQQGLPPSFPPPNQFSQTQIPAVPQRDPYFPPPVQSQETPNQQYQQPLAPQPHPQPGAPPHQQYQQTPHPQYSQPAPPQHQPPIPSINPPQLQSSLGHHVEEPPYVPSQTYPPNLRQPPSQPPSGPPAPPSQQFYGTAPHAYEPPPSRSGSGYSSGYGSSSGPAEQYRYGGPPQYGGKPPQLPTASLAVSGGSGYPQLPTARVLPQAIPTASAVSGGGSGSAGTGSKVSIDDVVDKVATMGFPRDHVRATVRKLTENGQSVDLNAVLDKLMNEGDMQPTRGWFGR* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1785 583 MobiDBLite consensus disorder prediction 369 387 - -
Lja2g1785 583 MobiDBLite consensus disorder prediction 244 491 - -
Lja2g1785 583 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 583 - -
Lja2g1785 583 MobiDBLite consensus disorder prediction 345 361 - -
Lja2g1785 583 MobiDBLite consensus disorder prediction 404 431 - -
Lja2g1785 583 Pfam UBA-like domain (DUF1421) 528 571 IPR010820 -
Lja2g1785 583 MobiDBLite consensus disorder prediction 244 281 - -
Lja2g1785 583 MobiDBLite consensus disorder prediction 446 460 - -
Lja2g1785 583 MobiDBLite consensus disorder prediction 37 55 - -
Lja2g1785 583 MobiDBLite consensus disorder prediction 282 312 - -
Lja2g1785 583 Coils Coil 176 196 - -
Lja2g1785 583 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 583 - -
Lja2g1785 583 MobiDBLite consensus disorder prediction 37 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1785 Lja-Chr2 18231056 18236983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1785 1 328 Trihelix Transcription Factor Family AT5G14540 41.691 3.09e-63 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1785 - - lja:Lj2g3v0932920.1 747.658