Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1777 ATGGCTGGATTGGAGGAATTAAGGAAAAAGCTCGCACCCTTGTTTGATGCGGAGAAGGGTTTCGGTTTCTCAACAAGTTCAACCTTGGACCCCTGTGATGATTCTTACACTCTTTCGGATGGTGGGACTGTAAACTTGTTGAGTAGATCATATGGGGTGTACAATATCAATGAGCTTGGGTTGCAGAAGTGCTCGTCGTCGTCTCGGTCTGTGGATGAAAGTCATGATTCTGATCACAGTGAGAAGACTTATAGGTGTGGTTCCCGGGAGATGAGAATATTTGGAGCAATAGGGAGTGGTGCTAGTAGTGTTGTGCAGAGAGCTATACATATACCAAAGCATAGGATTATTGCATTAAAGAAGATCAATATCTTTGAGAAGGAGAAAAGACAGCAGCTCCTTACTGAGATAAGGACATTATGCGAAGCACCTTGTTATCAGGGTCTTGTAGAATTTCATGGGGCATTTTACACTCCAGACTCTGGACAGATAAGTATAGCTTTGGAGTACATGGATGGAGGATCACTTGCAGATATCTTGCGAAAGCATAGAAGGATACCTGAACCTATTCTATCATCCATGTTTCAGAAGCTCCTACATGGTTTAAGCTATCTGCATGGAGTCAGACATTTAGTTCACCGAGATATAAAGCCTGCCAATTTACTTGTAAATCTCAAGGGGGAGCCAAAAATTACTGATTTTGGTATCAGTGCTGGTTTAGAGAGTTCAGTGGCAATGTGTGCTACATTTGTTGGAACGGTTACATACATGTCACCTGAGAGAATTCGAAATGAAAGCTATTCTTATCCGGCTGACATTTGGAGCCTTGGACTCGCGCTTCTTGAATGTGGTACAGGAGAATTTCCATATACAGCTAATGAAGGACCTGTCAATCTGATGTTGCAGATCCTGGATGATCCATCACCATCACCATCAAAACAGACTTTTTCACCTGAATTCTGCTCCTTTATTGATGCTTGCTTACAAAAGGATCCAGATGTTAGGCCAACAGCAGAGCAGCTTCTTTTCCATCCATTTATCACAAAGTACGAAACGGTCGAGGTAGATTTAGCAGGATATGTTCGTAGTGTTTTCGATCCTACACAAAGAATGAAGGACTTGGCAGATATGTTGACAATACATTATTACTTACTATTTGACGGACCTGTTGATTTGTGGCAAAATGCAAGGAACTTATATAGCGAAAGCTCAATTTTCAGTTTCTCTGGGAAACAACATGTTGGTCCAAACAACATTTTTAAAACTCTATCAAGTATTCGATGTACTTTAGTTGGTGAGTGGCCTCCTGAAAAGCTGGTGCATGTGGTTGAGAAGCTTCAGTGTCGTGCTCATGGTGAAGATGGAGTTGCAATCAGGGTCTCAGGGTCCTTTATAGTTGGCAATCAGTTCCTCATATGTGGAGATGGCATTCAAGTAGAGGGCTTGCCAAATTTTAAGGATCTTGACATTGATATCTCTAGCAAGCGAATGGGTACATTTCATGAACAATTCATCGTGGAACCAACGACCCATATTGGATGCTACACCATTGTTAATCAAGAACTGTATATTAACCAGTAA 1581 0.4156 MAGLEELRKKLAPLFDAEKGFGFSTSSTLDPCDDSYTLSDGGTVNLLSRSYGVYNINELGLQKCSSSSRSVDESHDSDHSEKTYRCGSREMRIFGAIGSGASSVVQRAIHIPKHRIIALKKINIFEKEKRQQLLTEIRTLCEAPCYQGLVEFHGAFYTPDSGQISIALEYMDGGSLADILRKHRRIPEPILSSMFQKLLHGLSYLHGVRHLVHRDIKPANLLVNLKGEPKITDFGISAGLESSVAMCATFVGTVTYMSPERIRNESYSYPADIWSLGLALLECGTGEFPYTANEGPVNLMLQILDDPSPSPSKQTFSPEFCSFIDACLQKDPDVRPTAEQLLFHPFITKYETVEVDLAGYVRSVFDPTQRMKDLADMLTIHYYLLFDGPVDLWQNARNLYSESSIFSFSGKQHVGPNNIFKTLSSIRCTLVGEWPPEKLVHVVEKLQCRAHGEDGVAIRVSGSFIVGNQFLICGDGIQVEGLPNFKDLDIDISSKRMGTFHEQFIVEPTTHIGCYTIVNQELYINQ* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1777 526 Gene3D - 366 525 - -
Lja2g1777 526 ProSitePatterns Protein kinases ATP-binding region signature. 97 120 IPR017441 GO:0005524
Lja2g1777 526 ProSiteProfiles Nuclear transport factor 2 domain profile. 374 524 IPR018222 -
Lja2g1777 526 PANTHER - 2 525 - -
Lja2g1777 526 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 2 525 - -
Lja2g1777 526 SUPERFAMILY Protein kinase-like (PK-like) 93 406 IPR011009 -
Lja2g1777 526 Gene3D Phosphorylase Kinase; domain 1 85 166 - -
Lja2g1777 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Lja2g1777 526 ProSiteProfiles Protein kinase domain profile. 91 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1777 526 SUPERFAMILY NTF2-like 372 524 IPR032710 -
Lja2g1777 526 CDD PKc_MAPKK_plant_like 92 351 - -
Lja2g1777 526 Gene3D Transferase(Phosphotransferase) domain 1 167 362 - -
Lja2g1777 526 SMART serkin_6 91 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1777 526 Pfam Protein kinase domain 95 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1777 Lja-Chr2 18120112 18124818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1777 38 526 MAP Kinase Kinase Gene Family AT5G40440 77.710 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Lja2g1777 Pkinase 9.2e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1777 K20607 - gmx:100784935 946.421