Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1763 ATGTCCCCTCACTCACTTTCCTCTTTGTTGTCCTCTGCAAACTCCAAAATGCAGAGCCTTTCTGTGTCACCTTCTTCATCTTCTTCTGCAAACCGCATAGCCATAGCTAAGTTCTCCCCTCAACTACTCTCCCATTTCCACCCATTTTCTTCTTCACCACTCACTTTCACCATCAAAGGACTTTCATCATGCCCATCTTCTTTTTTACTCCACAGAGCAGGAAAGTCTTCTCCTTTTCTCATTTCTGCTCCAAAAATCTCATCTTTCAGGGTCCTTGCTGCTTCTCTGCCAGAGGCTAAGAGTGATGAGCCTAGCAAACCCTCTGATTTGGTTCAGTCTCTGCAGCTTGGAGTCATGTTTGCAACTTGGTACCTCTTGAATATTTACTTCAACATCTACAACAAACAGGTTCTAAAAGTCTATCCATTTCCAGCAACAGTGACAGCATTTCAATTTGGCTTCGCTTCGTTGATGATTAATTTGATATGGACTTTAAATCTGCATCCCAGACCAAACATCACTCGTTCGCAGTTTTTGTCAATCCTTCCACTGGCTTTGGCTCATACAATGGGGAACCTGTTGACTAACATCAGTCTTGGCAAGGTTGCTGTGTCTTTCACCCACACAATCAAATCTATGGAGCCCTTTTTCACTGTTATTCTTTCTTCCCTTTTTCTGGGTGAGAGGCCCAGTTTCTGGGTGGTTTCTTCCCTTGTTCCGATAGTAGGGGGAGTGTCACTGGCATCAATGACTGAAGTCTCTTTCAATTGGATTGGTTTCAGTACTGCAATGGCATCTAATCTTACTAATCAATCACGGAATGTATTGAGCAAAAAACTAATGGCCAATGATGAGGAAACTTTGGACAATATCAATCTCTACTCGGTTATAACTATCATCTCCTTTATCCTGTTAGTCCCATTTGCTATATTTTTGGAGGGGATCAAGTTCACTCCTTCATACCTCCAATCTGCGGCAAGCCAAGGTTTGAATGTTAGAGAGCTATGTGTGAGATCAGTTTTGGCTGCGTTCTGCTTCCATGCATACCAGCAGGTTTCTTATGGAATATTACAGAAGGTCTCACCTGTGACCCACTCAGTTGGAAATTGTGTGAAGCGTGTGGTGGTCATAGTCTCTTCAGTTATCTTCTTCCAATATCCTGTCTCACCCGTTAACGCACTTGGAACTGCTATTGCCCTTGTTGGAGTTTTCTTGTATTCAAGGACAAAACGGAGTAAGCCAATGCCAAAGACAGCATAA 1260 0.4294 MSPHSLSSLLSSANSKMQSLSVSPSSSSSANRIAIAKFSPQLLSHFHPFSSSPLTFTIKGLSSCPSSFLLHRAGKSSPFLISAPKISSFRVLAASLPEAKSDEPSKPSDLVQSLQLGVMFATWYLLNIYFNIYNKQVLKVYPFPATVTAFQFGFASLMINLIWTLNLHPRPNITRSQFLSILPLALAHTMGNLLTNISLGKVAVSFTHTIKSMEPFFTVILSSLFLGERPSFWVVSSLVPIVGGVSLASMTEVSFNWIGFSTAMASNLTNQSRNVLSKKLMANDEETLDNINLYSVITIISFILLVPFAIFLEGIKFTPSYLQSAASQGLNVRELCVRSVLAAFCFHAYQQVSYGILQKVSPVTHSVGNCVKRVVVIVSSVIFFQYPVSPVNALGTAIALVGVFLYSRTKRSKPMPKTA* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1763 419 SUPERFAMILY Multidrug resistance efflux transporter EmrE 156 250 - -
Lja2g1763 419 PANTHER SOLUTE CARRIER FAMILY 35 64 413 - -
Lja2g1763 419 Pfam Triose-phosphate Transporter family 114 407 IPR004853 -
Lja2g1763 419 SUPERFAMILY Multidrug resistance efflux transporter EmrE 299 411 - -
Lja2g1763 419 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 114 417 IPR004696 GO:0016021|GO:0022857|GO:0055085
Lja2g1763 419 PANTHER PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 64 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1763 Lja-Chr2 17927342 17931442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1763 89 419 Antiporters AT5G33320 64.653 6.54e-149 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1763 K15283 - gmx:100819280 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1763 2 17927342 17931442 Lja2g1763 2 17927342 17931442 ECH