Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1749 ATGGAGTATAGTTTGGAAAAAAGATTTCCTCTCAGCGCAACAGATTACAAGTTATATGAAGAAGTTGGTGAAGGCGTTAGTGCCTCGGTGTACAGGGCTCTCTGCATTCCACTCAATGAGATAGTGGCCATCAAGGTTCTTGATCTTGAAAAGTGCAATAATGATTTGGATGGCATTCGGAGAGAGGTACAGACCATGAGTTTGATTGACCATCCAAATGTTTTACGAGCACATTGCTCTTTTACTGCTGGACATAATCTTTGGGTTGTGATGCCATATATGGCCGGGGGATCTTGCCTTCATATAATGAAATCTGCCTTTCCTGAGGGTTTTGAAGAGCCTGTTATTGCTACTTTATTGCGCGAGGTTCTCAGAGCTCTTGTCTATCTTCATGCCCATGGCCACATACACAGAGATGTTAAGTCTGGGAATATTTTGCTTGATTCTAATGGGTCAATCAAACTAGCTGACTTTGGAGTGTCAGCGTGTATGTTTGATGCTGGAGATAGGCAACGTTCAAGAAATACTTTTGTGGGAACACCTTGCTGGATGGCTCCTGAAGTTATGCAGCAATTACATGGATATGATTTTAAAGCAGATATATGGTCATTTGGCATAACAGCCCTTGAACTTGCTCATGGTCATGCCCCATTTTCCAAGTATCCACCAATGAAAGTTTTGCTCATGACATTACAAAATGCCCCTCCAGGTCTTGATTATGAAAGAGACAAGAGATTTTCAAAGTCTTTCAAAGAGTTGGTTGCCACCTGCTTAGTGAAAGACCCAAAGAAGCGTCCAAGCTCAGAAAAGCTTTTAAAGCACCACTTCTTCAAACATGCACGTGGCACTGAATATCTTGCCCGAACCATTCTTGAAGGCCTTGCTCCATTAGGAGATCGTTTTAGAATGCTGAAGGCTAAAGAAGCAGATTTATTGATGCAGAACAAGGCTCTATATGAGGATAAGGAACAGTTATCTCAGAAAGAATATATTCGAGGAATTAGTGCATGGAATTTTAACCTGGAAGATTTGAAAAGCCAAGCTGCTCTCATTCAAGATGCCGACATATCAAATGCAGAAGAGCCAAAAGAGATATCTGAATGCTTCATGGTTCCAGCAGTGGGGCTATCTCCTTTAGCAGCTAATAATTCTGATGGTGCACCCACATTGGACAAGGAGGATGGATTCAACAATCTTAAGGATTTAGAGAGTTCACTTGCTTCATTTCCTAGTAAACCTCTTCAAGCACTTAAAGGTTGTTTTGATGTTGGTGAGGATGATGTCAATAATACTAGTCCGAGAGATTTGGATCATGATTATGGAAAAATTGATAATGAAAGTTCTGGGCCTAGTAGTTCGCCACAACAAAATGCTATAACTCAGAATAAAAAGTTTTCAAGTGGTCCTCTGCAGCATGATAATTTTCTTCACAAAAAGGTTGTTACTGATGGGGACAGGGATTATCTACAAACAAAGTATTCTTCTGAACGGAATCATAGTGGTCCGCTGTTATATCGGCAGAAAAGAGATACCAACAATCTTCAACCGGTTGATGACACATCAGAAGGAGCAATTGTCCAGCGCAGGGGGCGGTTTAAGGTCACATCAGCAGATATTAGTCCAATGGGTCCTTCAAACTGCAATTCTGGCCCGTTTGGTGGATGTCCTAGTAGTCCCCCTAATCAGAACTCCATGGCTTCCACCATTCTTCCATCACTTCAGTGCATCTTGCAACATAACAATTTACAGAGGGAAGAAATTACTAAATTAATAAAGTATGCAGAGCAATCTTGTGGAAAGAATACAGAATCAGTAGAGGCAGGGGCAGTTGATCCTTTGCAGGTACCACCTGCAACAACTAGGGAGAGAGAGCTGCATTTTCAGGTGATTCAACTCCAACAGAGCATTGGGAGCCTTGTAGAGGAATTGCAAAGGCAAAAAATGAAAAATGTTCAGCTAGAGAAACAGTTGAACAGTATGGTTAACAAAGGTCAAAAGTGA 2001 0.4138 MEYSLEKRFPLSATDYKLYEEVGEGVSASVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMSLIDHPNVLRAHCSFTAGHNLWVVMPYMAGGSCLHIMKSAFPEGFEEPVIATLLREVLRALVYLHAHGHIHRDVKSGNILLDSNGSIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVATCLVKDPKKRPSSEKLLKHHFFKHARGTEYLARTILEGLAPLGDRFRMLKAKEADLLMQNKALYEDKEQLSQKEYIRGISAWNFNLEDLKSQAALIQDADISNAEEPKEISECFMVPAVGLSPLAANNSDGAPTLDKEDGFNNLKDLESSLASFPSKPLQALKGCFDVGEDDVNNTSPRDLDHDYGKIDNESSGPSSSPQQNAITQNKKFSSGPLQHDNFLHKKVVTDGDRDYLQTKYSSERNHSGPLLYRQKRDTNNLQPVDDTSEGAIVQRRGRFKVTSADISPMGPSNCNSGPFGGCPSSPPNQNSMASTILPSLQCILQHNNLQREEITKLIKYAEQSCGKNTESVEAGAVDPLQVPPATTRERELHFQVIQLQQSIGSLVEELQRQKMKNVQLEKQLNSMVNKGQK* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1749 666 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 663 - -
Lja2g1749 666 MobiDBLite consensus disorder prediction 445 469 - -
Lja2g1749 666 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1749 666 MobiDBLite consensus disorder prediction 494 518 - -
Lja2g1749 666 SUPERFAMILY Protein kinase-like (PK-like) 14 278 IPR011009 -
Lja2g1749 666 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1749 666 Gene3D Transferase(Phosphotransferase) domain 1 97 323 - -
Lja2g1749 666 MobiDBLite consensus disorder prediction 428 477 - -
Lja2g1749 666 MobiDBLite consensus disorder prediction 491 518 - -
Lja2g1749 666 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Lja2g1749 666 MobiDBLite consensus disorder prediction 428 444 - -
Lja2g1749 666 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 663 - -
Lja2g1749 666 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1749 666 CDD STKc_OSR1_SPAK 15 277 - -
Lja2g1749 666 Coils Coil 636 663 - -
Lja2g1749 666 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1749 Lja-Chr2 17631764 17643692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1749 1 663 MAP Kinase Kinase Kinase Kinase AT5G14720 65.982 0.0 909
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Lja2g1749 Pkinase 2.1e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1749 K08835 - gmx:100778837 1120.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1749 2 17631764 17643692 Lja2g1749 2 17631764 17643692 ECH