Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1748 ATGCCTGAAGGGGGCAGAAAAAGGATACATTTTAGCAGGCTTTATTCTTTTTCTTGTTTGAAATCTCCATTCAGAGATGGCCATTCCCAAATTGGGCAAAAAGGGTACTCAAGGGTTGTGTACTGCAATGATCCTGATAACTTGGAAGCAGTTCAGTTGAATTACGGTGGCAACTATGTTTCTACCACCAAGTATACAGCTTTTAATTTTATCCCCAAGTCTTTATTTGAGCAGTTCAGAAGGGTTGCAAATATCTACTTTCTTATTGTGGCTTGTGTCTCGTTTAGTCCACTGGCACCTTTTACGCCTTTAAGTATTGTTGCACCTTTGCTGGTTGTGATTGGAGCTACTATGGCCAAGGAAGCTGTGGAAGATTGGAGAAGGAGAAAGCAGGATATAGAGGCAAACAACCGAAAGGTTCAGGTATACAGTAGAGACTATACATTTGTGGAGACTAGATGGAAGAAACTTCGCGTTGGTGATATCATTAAAGTGTATAAGGATGAATACTTTCCTGCTGATCTTCTTCTGCTTTCATCAAGCTATGAGGATGGGGTTTGCTATGTTGATACAATGAATCTTGATGGAGAAACTAATCTAAAGTTAAAGCATGCCCTGGAGGCAACAGCTCATCTTCACAATGAAAAATCTCTACAAAAGTTTAGGGCTATGGTCAAATGTGAGGATCCTAATGAAAATCTGTACTCATTTATTGGAACTTTTCAGTACGAGGGTAAAGAACATCCTCTTTCCTTGCAGCAGATCCTTTTAAGAGATTCTAAGCTGAAAAACACTGAATATATCTATGGTGTGGTTATCTTTACCGGCCACGATACAAAAGTGATGCAGAATTCTACTGATCCTCCATCCAAGAGAAGCAAAATTGAGAGAAAAATGGATAAGATTATATACATCCTCTTCAGTTCCTTGATTTTTATATCCTTCATTGGCTCGGTCGTTTTTGGTATTGAGACCAAAAGGGATATTAGTGGTGGCAAGTACAGGAGATGGTATCTTCATCCAGAGAATACAACAGTGTTTTATGATCCTAGAAGGGCAACACTTGCTTCTATTCTCCATTTTTTGACTGCCCTGATGTTGTATGGATATCTAATTCCAATTTCACTCTATGTATCCATAGAACTTGTGAAAGTTCTGCAGGCTATTTTCATCAACCAAGATCAGGAAATGTATTATGAAGAAACAGATAGGCCAGCTCGTGCACGCACATCTAATTTGAATGAGGAACTTGGTCAGGTTGATACAATATTGTCCGACAAGACTGGTACTTTGACATGTAACTCTATGGAATTTGTCAAAAGTTCCATAGGGGGCATTCCATATGGTCGTGGGATGACAGAAGTGGAGAAGGCACTTGCTAAGAGAGGGAGCAAAGGGGAATCTGAATTTGATGGTGTATCATCTGATTTCTTGGGCCAGAATACTGATGCTGTGGACTCTCAAAAGCCAGTTAAGGGATTTAACTTCAGAGATGAACGCATAATAAATGGGCAATGGGTTAAGGAACCTCATCCTGATATCATACAGAAATTCTTTCGAGTGTTAGCTATTTGTCATACAGCTATTCCAGATGCTGATAAAGATTCAGGAGAAATTTCCTACGAAGCCGAGTCACCAGATGAAGCAGCATTTGTCATAGCTGCGAGGGAGCTTGGTTTTGAGTTTTTTGCAAGGACACAAACAAGGATATCATTGCATGAATTAAATTACGAAAGTGGAAAAAAGGTTGACAGAGCGTACCCGCTTCTGCATGTCTTAGAGTTCAGTAGTGCCCGCAAAAGAATGTCAGTGATTGTGAGGAATGAGGAAAATCAAATATTGCTCCTATGCAAGGGTGCAGACAGTGTTATGTTTGAAAGGCTCTCGCAATATGGAAGACAGTTTGAGGCTGAAACCAAGGATCATATCAAAAGGTATTCGGAGGCAGGTTTAAGAACTCTTGTAATTGCATACCGTGAACTTGGTGAAGAAGAATATAAGCTGTGGGACAAGGAGTTCTCAAAGGCCAAAACTTCTGTAGCAGCAGACCGAGATGCACTTGTAGATGAAGCTGCAGATAAGATGGAAAGAGATTTGATACTTCTTGGTGCTACGGCAGTTGAGGATAGACTGCAAAAGGGGGTACCTGAATGTATTGAAAAGCTTGCTCAAGCAGGAATCAAGTTATGGGTATTGACTGGGGACAAGATGGAAACTGCAGTTAACATAGGGTATGCATGTAGTTTACTTAGACAAGACATGAAAAAGATAGTGATCACTCTTGATTCACCAGATATCCTGTCGTTGGAAAAACAAGGGGATAAAGATGCTCTAGTAAAGGCCTCTCTTGAAAGCATTAAGAAGCAAATTAGTGAGGGAATCTCGCAAGTCAAGTCCGCAAAAGAGAGTTCTAATACAGATAAAGAAACTTCTGCATTTGGCTTGATAATTGATGGGAAGTCCTTGGATTATTCTCTTAACAAGAATTTGGAGAAGTCCTTCTTTGAGTTGGCAGTTAGTTGTGCCTCTGTCATATGTTGCAGATCTTCACCCAAACAGAAAGCTCGTGTAACAAGATTGGTGAAATTGGGAACAGGGAAGACAATCCTATCTATCGGTGATGGGGCAAATGATGTCGGCATGCTTCAGGAAGCTCATATTGGAGTTGGTATTAGTGGTGCTGAAGGGATGCAGGCTGTAATGGCAAGTGATTTTGCAATTGCTCAATTCCGTTTTTTGGAGCGATTGTTGCTGGTGCATGGCCACTGGTGTTATAGGCGAATATCATTGATGATATGTTACTTTTTCTATAAAAACATTGCATTTGGATTTACCCTATTTTGGTTTGAGGCATATGCTTCTTTCTCTGGACAACCTGCGTACAATGATTGGTACATGTCATTTTACAATGTCTTCTTCACTTCACTTCCAGTCATCGCTCTAGGTGTTTTTGATCAGGATGTTTCTGCCAAACTTTGCCTGAAGTATCCCTTTCTATATCTAGAGGGAGTAGAGGACACCCTCTTCAGCTGGCCCCGGATCATCGGGTGGATGTTGAATGGCGTTATTAGCTCCTTAGCCATCTTCTTCTTGACCACAAATTCCATCATAAACCAGGCCTTCAGAAGAGATGGTCAGGTGGTTGATTTCGAAATACTAGGTGTCACAATGTATTCTATTGTGGTGTGGACAGTGAATTGCCAAATGGCACTTTCCATCAACTACTTCACTTGGATCCAGCATTTTTTCATATGGGGAAGCATTTTCTTCTGGTATGTGTTCTTGTTGGTGTATGGCTATCTCTCTCCGGCCATATCCTCAACAGCATACATGGTTTTTGTGGAGGCTTGTGCTCCCAGTGCTGTGTACTGGCTAGCTACCGTTTTGGTTGTTGTGTGTGTGCTTCTACCCTATTTCACTTATAGAGCTTTCCAAAGTAGGTTTCTACCAATGTACCATGATATCATACAGAGAAAACGAGTCGAAGGGTTTGAAGTTGAGATATCTGATGAGTTGCCTACACAAGTTCAGGGAAAACTAATGCATATGAGAGAAAGATTGAAGCAAAGGGAACCATGA 3579 0.4085 MPEGGRKRIHFSRLYSFSCLKSPFRDGHSQIGQKGYSRVVYCNDPDNLEAVQLNYGGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLIVACVSFSPLAPFTPLSIVAPLLVVIGATMAKEAVEDWRRRKQDIEANNRKVQVYSRDYTFVETRWKKLRVGDIIKVYKDEYFPADLLLLSSSYEDGVCYVDTMNLDGETNLKLKHALEATAHLHNEKSLQKFRAMVKCEDPNENLYSFIGTFQYEGKEHPLSLQQILLRDSKLKNTEYIYGVVIFTGHDTKVMQNSTDPPSKRSKIERKMDKIIYILFSSLIFISFIGSVVFGIETKRDISGGKYRRWYLHPENTTVFYDPRRATLASILHFLTALMLYGYLIPISLYVSIELVKVLQAIFINQDQEMYYEETDRPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKSSIGGIPYGRGMTEVEKALAKRGSKGESEFDGVSSDFLGQNTDAVDSQKPVKGFNFRDERIINGQWVKEPHPDIIQKFFRVLAICHTAIPDADKDSGEISYEAESPDEAAFVIAARELGFEFFARTQTRISLHELNYESGKKVDRAYPLLHVLEFSSARKRMSVIVRNEENQILLLCKGADSVMFERLSQYGRQFEAETKDHIKRYSEAGLRTLVIAYRELGEEEYKLWDKEFSKAKTSVAADRDALVDEAADKMERDLILLGATAVEDRLQKGVPECIEKLAQAGIKLWVLTGDKMETAVNIGYACSLLRQDMKKIVITLDSPDILSLEKQGDKDALVKASLESIKKQISEGISQVKSAKESSNTDKETSAFGLIIDGKSLDYSLNKNLEKSFFELAVSCASVICCRSSPKQKARVTRLVKLGTGKTILSIGDGANDVGMLQEAHIGVGISGAEGMQAVMASDFAIAQFRFLERLLLVHGHWCYRRISLMICYFFYKNIAFGFTLFWFEAYASFSGQPAYNDWYMSFYNVFFTSLPVIALGVFDQDVSAKLCLKYPFLYLEGVEDTLFSWPRIIGWMLNGVISSLAIFFLTTNSIINQAFRRDGQVVDFEILGVTMYSIVVWTVNCQMALSINYFTWIQHFFIWGSIFFWYVFLLVYGYLSPAISSTAYMVFVEACAPSAVYWLATVLVVVCVLLPYFTYRAFQSRFLPMYHDIIQRKRVEGFEVEISDELPTQVQGKLMHMRERLKQREP* 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1748 1192 PRINTS P-type cation-transporting ATPase superfamily signature 872 891 - -
Lja2g1748 1192 PRINTS P-type cation-transporting ATPase superfamily signature 190 204 - -
Lja2g1748 1192 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Lja2g1748 1192 SUPERFAMILY Calcium ATPase, transmembrane domain M 48 1150 IPR023298 -
Lja2g1748 1192 SFLD C1.7: P-type atpase like 408 923 - -
Lja2g1748 1192 Gene3D - 112 286 - -
Lja2g1748 1192 Gene3D - 703 912 IPR023214 -
Lja2g1748 1192 SUPERFAMILY Calcium ATPase, transduction domain A 142 284 IPR008250 -
Lja2g1748 1192 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 501 661 IPR023299 GO:0000166
Lja2g1748 1192 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 842 954 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja2g1748 1192 Gene3D - 548 702 IPR023299 GO:0000166
Lja2g1748 1192 SUPERFAMILY HAD-like 419 927 IPR036412 -
Lja2g1748 1192 CDD P-type_ATPase_APLT_Dnf-like 57 1032 - -
Lja2g1748 1192 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Lja2g1748 1192 SFLD p-type atpase 408 923 IPR044492 -
Lja2g1748 1192 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 5 1164 - -
Lja2g1748 1192 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Lja2g1748 1192 Coils Coil 116 136 - -
Lja2g1748 1192 Pfam Phospholipid-translocating P-type ATPase C-terminal 900 1150 IPR032630 -
Lja2g1748 1192 Pfam E1-E2 ATPase 136 329 - -
Lja2g1748 1192 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 5 1164 - -
Lja2g1748 1192 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1158 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lja2g1748 1192 Pfam Cation transport ATPase (P-type) 541 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1748 Lja-Chr2 17618321 17627142 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1748 1 1163 Primary Pumps ATPases AT1G68710 63.819 0.0 1597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1748 K01530 - gmx:100817020 2119.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1748 2 17618321 17627142 Lja2g1748 2 17618321 17627142 ECH