Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1745 ATGGCTGATTATTCAGGAAGCAACGAGGTGATTTTGAATGTGAACAATGAAACCTCCAAAAAATGTGATAGCATTGAGGAAGACTGTGTGCCACTTTTGCAGAAGTTGGTAGCAGAGGTGTTGGGCACATATTTCTTGATATTTGCAGGTTGTGCTTCGGTGGTGGTGAACCTTAATAATGATAAGGTGGTGACACTTCCTGGGATTGCAATTGTTTGGGGACTTGCTGTTATGGTTTTGGTTTACTCTATTGGTCACATCTCTGGTGCACATTTTAATCCAGCTGTTACTGTTGCTCATGCTACCACCAAAAGTTTTCCCGTGAAGCAGGTGAACCAAATATAA 345 0.4174 MADYSGSNEVILNVNNETSKKCDSIEEDCVPLLQKLVAEVLGTYFLIFAGCASVVVNLNNDKVVTLPGIAIVWGLAVMVLVYSIGHISGAHFNPAVTVAHATTKSFPVKQVNQI* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1745 114 PANTHER AQUAPORIN NIP2-1 5 112 IPR034294 -
Lja2g1745 114 SUPERFAMILY Aquaporin-like 32 111 IPR023271 -
Lja2g1745 114 PRINTS Major intrinsic protein family signature 34 53 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lja2g1745 114 PRINTS Major intrinsic protein family signature 73 97 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lja2g1745 114 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 5 112 - -
Lja2g1745 114 Gene3D Glycerol uptake facilitator protein. 3 112 IPR023271 -
Lja2g1745 114 ProSitePatterns MIP family signature. 91 99 IPR022357 -
Lja2g1745 114 Pfam Major intrinsic protein 30 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1745 Lja-Chr2 17567890 17568476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1745 20 111 Major Intrinsic Protein MIP AT4G18910 75.000 4.37e-45 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1745 K09874 - gmx:100786924 179.874