Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1738 ATGGCAAGCACTCCTTATAGTAATATTCCATCTCAAACAAAAGCTTGGGTCTACTCTCAATATGGAGACATAGAAGAGATTCTCAAGTTTGATCCAAATGTTCTCATCAAGGTTGAGGCTGCAGCCCTTAATCCTGTAGATTCCAAGAGAGCTCTTGGCCATTTCAAGGACATTGACTCTCCTTTACCTACTGTTCCGGGGTACGATGTTGCAGGTGTGGTGGTCAAAGTGGGAAGCCAGGTGAAGAAACTAAAGGTGGGGGATGAAGTTTATGGTGATGTTAATGAGATCACTTTGGACCATCCAAAAACTGTTGGTTCTTTGGCAGAGTACACTGCTGCTGAAGAAAAAGTTCTTGCTCACAAACCCTCCAACTTGAGCTTTATTGAAGCTGCTAGCCTCCCCTTAGCAATCATCACTGCTTATCAAGGACTTGAAACAGCTCAGTTTTCTGCTGGCAAATCTATACTTGTTCTGGGAGGTGCTGGAGGAGTTGGATCCCTTGTTATTCAGCTCGCCAAGCATGTTTTTGAAGCATCAAAGATTGCAGCAACTGCTAGTACTGGCAAACTGGAATTTTTGAGGAAATTGGGAGCAGACTTGCCTATTGACTATACAAAGGAGAATTTTGAAGAAGTTTCAGAAAAGTTTGATGTGGTGTACGATGCAGTAGGGCAGAGTGACAGGGCACTGAAAGCTGTTAAAGAAGGGGGCAAGGTTGTGACAATTCTGCCACCTGGAACTCCACCAGCTATCCCCTTCTTACTCACTTCAGATGGGGCAGTGTTGGAGAAACTGCAACCTTACTTGGAGAGTGGCAAGGTGAAGCCAATACTGGATCCTAAGAGCCCCTTTCCATTTTCTCAGACTGTGGAAGCATTTTCCTACCTCAACACTAGCAGGGCTACTGGGGAAGTAGTCATATATCCCATCCCATGA 939 0.4494 MASTPYSNIPSQTKAWVYSQYGDIEEILKFDPNVLIKVEAAALNPVDSKRALGHFKDIDSPLPTVPGYDVAGVVVKVGSQVKKLKVGDEVYGDVNEITLDHPKTVGSLAEYTAAEEKVLAHKPSNLSFIEAASLPLAIITAYQGLETAQFSAGKSILVLGGAGGVGSLVIQLAKHVFEASKIAATASTGKLEFLRKLGADLPIDYTKENFEEVSEKFDVVYDAVGQSDRALKAVKEGGKVVTILPPGTPPAIPFLLTSDGAVLEKLQPYLESGKVKPILDPKSPFPFSQTVEAFSYLNTSRATGEVVIYPIP* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1738 312 CDD MDR_like_2 14 308 - -
Lja2g1738 312 Pfam Zinc-binding dehydrogenase 197 308 - -
Lja2g1738 312 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 153 174 IPR002364 GO:0008270|GO:0016491
Lja2g1738 312 Pfam Alcohol dehydrogenase GroES-like domain 33 93 IPR013154 -
Lja2g1738 312 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 126 252 IPR036291 -
Lja2g1738 312 SUPERFAMILY GroES-like 10 160 IPR011032 -
Lja2g1738 312 SMART PKS_ER_names_mod 22 308 IPR020843 GO:0016491
Lja2g1738 312 PANTHER 2-METHYLENE-FURAN-3-ONE REDUCTASE-RELATED 7 312 - -
Lja2g1738 312 Gene3D - 33 308 - -
Lja2g1738 312 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 7 312 IPR044626 GO:0016628
Lja2g1738 312 Gene3D - 145 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1738 Lja-Chr2 17416566 17418316 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1738 63 253 Monolignol Biosynthesis Gene Families AT4G37980 24.434 1.48e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1738 K18980 - gmx:100791274 465.307