Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1737 ATGGCAAGCACTCCTAATATTCCATCTCATACAAAAGCTTGGGTGTACTCAGAGTATGGGAATATAGAGCACATTCTCAAATTTGATCCTAATGTCCCTACACCAGACATCAAAGAAAACCAGGTGCTCATCAAGGTTGTGGCTGCAGCCCTTAATCCTGTGGATTACAAGAGAGCTCTGGGGTATTTCAAGGACTTTGAGTCTCCTTTACCCACTGTGCCAGGGTATGATGTTGCTGGTGTGGTGGTCAGAGTGGGAAGCCAGGTGAAAAAATTTAAGGTTGGGGATGAGGTCTATGGTGATATTAATGAGAAAGCCTTGGACCCAAAAACTAGTGGTACTTTGGTAGAATACACGGCTGCTGAAGAGAAAGTGTTGGCTCACAAACCCTCCAACTTGAACTTTATTGAAGCTGCTAGCCTCCCTTTAGCCATCATCACTGCTTATCAAGGACTTGAAACTGCTGAATTTTCTGCTGGCAAATCTATACTTGTTCTGGGTGGTGCTGGAGGAGTTGGAACACTTGCTATTCAGCTCGCCAAGCATGTTTTTGGGGCATCTAAGGTTGCAGCTACTGCTAGTACTGCCAAACTAGAATTGTTGAAGAAATTGGGAGCAGACTTGCCTATTGATTATACAAAAGAGAATTTTGAAGAACTTTCAGAAAAGTTTGATGTGGTGTACGATGCAGTAGGGCAGAGTGAGAGGGCATTGAAGGCTATTAAAGAAGGGGGCAAGGTAGTGACAATATTGCCACCTGGAACTCCACCAGCTATTCCTTTCATACTCACTTCAGATGGTGCTGTGTTGGAGAAACTGCAACCTTACTTAGAAAGTGGGAAGGTGAAGCCAATTTTGGATCCTAAGAGCCCCTTTCCATTTTCTCAGGCTGTGGAAGCATTTGCCTACCTCAACACTAACAGGGCCACTGGAAAAGTAGTCATTTATCCCATCCCATGA 960 0.4437 MASTPNIPSHTKAWVYSEYGNIEHILKFDPNVPTPDIKENQVLIKVVAAALNPVDYKRALGYFKDFESPLPTVPGYDVAGVVVRVGSQVKKFKVGDEVYGDINEKALDPKTSGTLVEYTAAEEKVLAHKPSNLNFIEAASLPLAIITAYQGLETAEFSAGKSILVLGGAGGVGTLAIQLAKHVFGASKVAATASTAKLELLKKLGADLPIDYTKENFEELSEKFDVVYDAVGQSERALKAIKEGGKVVTILPPGTPPAIPFILTSDGAVLEKLQPYLESGKVKPILDPKSPFPFSQAVEAFAYLNTNRATGKVVIYPIP* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1737 319 Gene3D - 18 315 - -
Lja2g1737 319 Gene3D - 152 266 - -
Lja2g1737 319 SMART PKS_ER_names_mod 20 315 IPR020843 GO:0016491
Lja2g1737 319 PANTHER 2-METHYLENE-FURAN-3-ONE REDUCTASE-RELATED 1 319 - -
Lja2g1737 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 133 259 IPR036291 -
Lja2g1737 319 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 160 181 IPR002364 GO:0008270|GO:0016491
Lja2g1737 319 CDD MDR_like_2 12 315 - -
Lja2g1737 319 SUPERFAMILY GroES-like 9 165 IPR011032 -
Lja2g1737 319 Pfam Alcohol dehydrogenase GroES-like domain 40 101 IPR013154 -
Lja2g1737 319 Pfam Zinc-binding dehydrogenase 204 315 - -
Lja2g1737 319 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 1 319 IPR044626 GO:0016628
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1737 Lja-Chr2 17402183 17403771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1737 39 263 Monolignol Biosynthesis Gene Families AT4G37980 25.097 5.27e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1737 K18980 - gmx:100791274 503.442