Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1719 ATGATCAAGCTTTTAACAAGCAGCAAATTATTGACCATATCTATCATCATTCTTCTTCAACAAAACTTGGTATTTTCTAAATGCACTTGTGATAACCAAGTTCAAGATTCAGATAACAATGACTCTGAGGCACTGAAGTTCAAGTTGATTGCTGTGGCATCAGTTTTAGCTGCTAGCCTCATTGGTGTGTGCTTGCCAATCTTTGCTAAAAGCATTAGCAACCCTGAAAGTCACTTGTACTTCCTAATTAAAGCATTTTCTGCTGGTGTGATCCTCGCGACCGGGTTCATCCACATTCTTCCTGATGCTTTTGAGGCCTTAACAAATCCATGTATAGGTGAAAAGCCATGGGGAGTGTTTCCTTTTTCAGGGTTTGTGGCAATGATGGCAGCAATCGGGACATTGATCCTGGAAGCTTTCGCTATGGGGTACCATAAAAGGTCTGAAATGAGAAATGCTCTGCCATTGAATAAGGATGAAGAGACTCATGATGCAGTTCATGGTAGTCATGTTCATAGCTCTGAACTTGCCTCTGAGAAATTAGAATCACCAGATCTTCTTCGGTATGACATAGTTTCTCAGATTCTGGAGCTGGGTATGGTGCTTCACTCAATCATTTTAGGGATATCTCTTGGGGTGTCCAGAAGTCCTAACACAATCAAGCCTTTGGTGGCTGTACTAAGTTTCCATCAATGCTTTGAAGGCTTGGGACTTGGTGGGTGCATTTCCCAGGCAAAACTTAAACATTATAAGGTTGCAATTATGGTGCTATTGTTTTGCCTTATTTTCCCAATTGGAATTGGTATTGGTATTGGCATATCAAACACTTACAATGAGAACAGTTCAAAGGCGCTTATAGTTGAAGGGGTTCTGCTATCAGCATCTGCAGGAATCCTGATTTACATGGCACTTGTTGATCTTCTTGCCACTGACTTCATGGGCACAAGAATGTTAAGCAGTTTTAGGCTCCAATTGGGGGCAAGTTTAGCCCTTCTTATGGGATTGATTTGCATGTCAATCTTGGCATTGTGGGAATAA 1038 0.4133 MIKLLTSSKLLTISIIILLQQNLVFSKCTCDNQVQDSDNNDSEALKFKLIAVASVLAASLIGVCLPIFAKSISNPESHLYFLIKAFSAGVILATGFIHILPDAFEALTNPCIGEKPWGVFPFSGFVAMMAAIGTLILEAFAMGYHKRSEMRNALPLNKDEETHDAVHGSHVHSSELASEKLESPDLLRYDIVSQILELGMVLHSIILGISLGVSRSPNTIKPLVAVLSFHQCFEGLGLGGCISQAKLKHYKVAIMVLLFCLIFPIGIGIGIGISNTYNENSSKALIVEGVLLSASAGILIYMALVDLLATDFMGTRMLSSFRLQLGASLALLMGLICMSILALWE* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1719 345 PANTHER ZINC/IRON TRANSPORTER 17 345 - -
Lja2g1719 345 TIGRFAM zip: ZIP zinc/iron transport family 30 344 IPR004698 GO:0005385|GO:0016021|GO:0071577
Lja2g1719 345 Pfam ZIP Zinc transporter 46 342 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lja2g1719 345 PANTHER ZINC TRANSPORTER 5-LIKE 17 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1719 Lja-Chr2 17230987 17232548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1719 11 344 Inorganic Solute Cotransporters AT3G12750 48.688 3.44e-103 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1719 K14709 - qsu:111993283 389.037