Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1718 ATGGAATTAGGTATGTGGACTTTGACAGGAGCAATTATAGGGGTTATTCTCATTACAGTTATCATTGCATGCATCATGTATTATATTAGATGCTTCAGATCAGCCCCACCAACAAACGAAATAACATTTGGAAACATGTTAAAGAAAACAGCTTGTCCAAGAGTTTCTATCAGGGAAGTGTACTCTGCCACTAACCATCTTAATGAAATGAATATCATTGGAGAGGGAACTGCAGGTAAGGTCTACAAAGGCATATTGACAAATAAACAAGATGTTGCAGTAAAGCACATAATCAATGATGATGGAAATATAGAAACTTTTGTCAGAGAAGTTACAAGCCTGTCTCATGTCAGGCACCCAAATCTTGTTGCTTTGTTGGGTTTCTGTAATGAGGCAGATGAATGCTTTCTTGTCTATGAGCTATGTCCCAATGGGAGTCTTTCAGAGTGGCTATTTGGCAAGAACAAGGTGTTGTCCTGGATACAAAGACTAGAAATTGCAATTGATAGTGCTCGAGGTCTTTGGTTTTTACATGCATATCCCGGAGGCTGCATCGTTCACCGGGATATCAAGGCAAAACTGCTCACCAAGAATGGTAGCATTACAGAATTTGCTGATCCTAAACTTAAAGGAGAATACTCAGAGGAAGCATTTGATTTTACACTTCAGCTTGCTCTTGCATGCACAGCACTCAACCAACAAAGACCATCCATGGAGCTGGTTGTGATAAAACTGGAGGAGGCCTTATTAATTTCAAAAGAGAGGAAGGTGTATACTACAGAAACTCCAGCAGACAAAATTTCTAAGGATTCATGA 816 0.3958 MELGMWTLTGAIIGVILITVIIACIMYYIRCFRSAPPTNEITFGNMLKKTACPRVSIREVYSATNHLNEMNIIGEGTAGKVYKGILTNKQDVAVKHIINDDGNIETFVREVTSLSHVRHPNLVALLGFCNEADECFLVYELCPNGSLSEWLFGKNKVLSWIQRLEIAIDSARGLWFLHAYPGGCIVHRDIKAKLLTKNGSITEFADPKLKGEYSEEAFDFTLQLALACTALNQQRPSMELVVIKLEEALLISKERKVYTTETPADKISKDS* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1718 271 Gene3D Phosphorylase Kinase; domain 1 34 141 - -
Lja2g1718 271 PANTHER OS01G0253100 PROTEIN 194 256 IPR045271 GO:0004714|GO:0006468
Lja2g1718 271 PANTHER OS01G0253100 PROTEIN 3 192 IPR045271 GO:0004714|GO:0006468
Lja2g1718 271 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 194 256 - -
Lja2g1718 271 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 3 192 - -
Lja2g1718 271 ProSiteProfiles Protein kinase domain profile. 67 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1718 271 Pfam Protein tyrosine and serine/threonine kinase 70 210 IPR001245 GO:0004672|GO:0006468
Lja2g1718 271 Gene3D Transferase(Phosphotransferase) domain 1 142 195 - -
Lja2g1718 271 SUPERFAMILY Protein kinase-like (PK-like) 49 193 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1718 Lja-Chr2 17228156 17229931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1718 26 230 Receptor kinase-like Gene Family AT5G07280 37.441 1.07e-31 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Lja2g1718 PK_Tyr_Ser-Thr 2.7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1718 - - aprc:113867593 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1718 2 17228156 17229931 Lja2g1718 2 17228156 17229931 ECH