Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1715 ATGTGTTGCTATATGGGAAGAACAGAACAACACAATGAACACGGAAATAGAACCACGCCTTCCTTGGTTGCTTTCACTGATACTCAAAGATTGATTGGTGATGCTGCAAAACATCAGGCTGCAACAAACCCATCAAACACTGGCTTTGCAAAGAGGTTGATTGGTAGGAAATACAGTGATTCAGTTGTTCAGGATGATGTTAAGCATTGGCCTTACCAGGTCATTGCTGGAACTGATGACAAACCCACTATTGTTGTTAAGTACAAGGGTGAGGAAAAGTACCTTGTTCCTGAGGATATCTCATCCATGGTTCTCACAAATATGAAGGAGATTGCTGAAACATTTTTGGGTTCACCTGTGAATAATGCAGTTATCACTGTGCCTGCTTTTTTCAATGACTCGCAGCGAAAAGCCACCAAAGAAGCCGGTGCTATTGCTGGCCTTGATGTTATGCGAATAATCAATGAACCAACCGCTGCAGGTCTCGCATATGGCCTTCAAAAGAAATCAAGGTTTGATGGCAAGTGCAATATTTTAATCTTTGATCTCGGTGGCGGCACTTTTGATGTGTCTATTCTCACAATTGAGGATGATAGCTTTGAAGTGAAGGCCACTGCTGGTGATACTCACCTTGGAGGAGAGGACATTGATAACAGAATGGTGAGCTATTTCGCTCAGGAGTTCATGAGGAAGCACAAGAAGGACATTAGTGGGAACCCAAGAGCCTTGAGGAGGTTGAGAAGTGCGTGTGAGAGGGCAAAAAGGGCACTCTCATTTGCCAGTGATACCACCATTGAGGAGCTGAACATTGATCTCTTTAACAAGTGTATGGAGACAGTTGAGAGGTGTCTTGAAGACTCTAAGATGGACAAGAGTGACATAGTTGATGTTGTTCTTGTTGGTGGTTCATCAAGGATTCCCAAAGTGCAGCAGCTATTGCAGGATTTTTTCAATGGGAAGGAACTGTGCAGGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTTCAGGCTGCTTTGTTGACTGAAGGCGTAAAGAATGTTCCAAACTTAGTGCTTTTGGATGTTACACCTCTTTCACTTGGTTTTGGGATAAAAGGAGATCGCATGAATGTCGTGATTCCAAGGAATACTATTATTCCTTCAAGGAAGAAAAAAAGATGCGTTACATGTGAAGATAACATATCCACTGCCCTGTTAGAGGTTTATGAGGGTGAGAGAGCAAGAGCTAGTGATAACCATTTGCTGGGCTCTTTTAATCTTCCTGTCACTCCTGCTCCTCGTGGCTATCCTTCTAGTGTATGCTTTTCTATAGATGAAAATGGCATTCTAACTGTTTCTGTTGAGGAAGAAGCCACCGGTAATAAGAATGAGATAACCATAACCCATGAAACAGAAAGGCTGTCAGCTGAAGAAATCAGAAAAATGATTCAAGAAGCTGAAAATCACGAAGTTGATGATATGGAGTTCAAGAAGAAGGTGGAGGCAATGATTGCTCTTGATCGTTACCTTTACAAAATGAACAAATATATGAAAGATAAGTGTGTCAGTTCTAAGCTTCCTCCAATGGTCCAAGATAAGATCAATTCAGCTATTGTAAAGGGCAAAGATTTGCTTGATGATGACCAGCAGCAAGAGACATTCGTATATGTGGAGTTTCTAAGGGAGCTCAAGAGCATTATGCAACCTGGTTTGGCCAAGATCAACAATGGTAGCACTAGTACTCCACCGGCCAAATCAATTGCGCGCTGCAAGGACCTGGGGCAAGTTGAAGACGCTTAG 1788 0.4273 MCCYMGRTEQHNEHGNRTTPSLVAFTDTQRLIGDAAKHQAATNPSNTGFAKRLIGRKYSDSVVQDDVKHWPYQVIAGTDDKPTIVVKYKGEEKYLVPEDISSMVLTNMKEIAETFLGSPVNNAVITVPAFFNDSQRKATKEAGAIAGLDVMRIINEPTAAGLAYGLQKKSRFDGKCNILIFDLGGGTFDVSILTIEDDSFEVKATAGDTHLGGEDIDNRMVSYFAQEFMRKHKKDISGNPRALRRLRSACERAKRALSFASDTTIEELNIDLFNKCMETVERCLEDSKMDKSDIVDVVLVGGSSRIPKVQQLLQDFFNGKELCRSINPDEAVAYGAAVQAALLTEGVKNVPNLVLLDVTPLSLGFGIKGDRMNVVIPRNTIIPSRKKKRCVTCEDNISTALLEVYEGERARASDNHLLGSFNLPVTPAPRGYPSSVCFSIDENGILTVSVEEEATGNKNEITITHETERLSAEEIRKMIQEAENHEVDDMEFKKKVEAMIALDRYLYKMNKYMKDKCVSSKLPPMVQDKINSAIVKGKDLLDDDQQQETFVYVEFLRELKSIMQPGLAKINNGSTSTPPAKSIARCKDLGQVEDA* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1715 595 Gene3D - 276 323 - -
Lja2g1715 595 Gene3D - 169 211 - -
Lja2g1715 595 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 348 498 IPR029047 -
Lja2g1715 595 Gene3D Actin; Chain A, domain 4 212 264 - -
Lja2g1715 595 Gene3D Actin; Chain A, domain 4 265 275 - -
Lja2g1715 595 SUPERFAMILY Actin-like ATPase domain 11 168 IPR043129 -
Lja2g1715 595 Coils Coil 243 263 - -
Lja2g1715 595 Gene3D - 499 593 IPR029048 -
Lja2g1715 595 Pfam Hsp70 protein 11 561 IPR013126 GO:0005524|GO:0140662
Lja2g1715 595 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 498 574 IPR029048 -
Lja2g1715 595 PRINTS 70kDa heat shock protein signature 352 371 - -
Lja2g1715 595 PRINTS 70kDa heat shock protein signature 431 447 - -
Lja2g1715 595 PRINTS 70kDa heat shock protein signature 14 26 - -
Lja2g1715 595 PRINTS 70kDa heat shock protein signature 294 310 - -
Lja2g1715 595 PRINTS 70kDa heat shock protein signature 123 143 - -
Lja2g1715 595 PRINTS 70kDa heat shock protein signature 326 346 - -
Lja2g1715 595 PRINTS 70kDa heat shock protein signature 36 44 - -
Lja2g1715 595 ProSitePatterns Heat shock hsp70 proteins family signature 2. 180 193 IPR018181 -
Lja2g1715 595 ProSitePatterns Heat shock hsp70 proteins family signature 3. 297 311 IPR018181 -
Lja2g1715 595 Gene3D - 49 103 - -
Lja2g1715 595 PANTHER HEAT SHOCK PROTEIN 70KDA 11 570 IPR013126 GO:0005524|GO:0140662
Lja2g1715 595 PANTHER HEAT SHOCK 70 KDA PROTEIN 11 570 - -
Lja2g1715 595 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 349 502 IPR029047 -
Lja2g1715 595 Gene3D - 11 168 - -
Lja2g1715 595 MobiDBLite consensus disorder prediction 568 595 - -
Lja2g1715 595 SUPERFAMILY Actin-like ATPase domain 174 343 IPR043129 -
Lja2g1715 595 Gene3D - 324 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1715 Lja-Chr2 17200517 17202471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1715 12 574 Calmodulin-binding Proteins AT3G12580 61.840 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1715 K03283 - gmx:102667578 706.442