Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1713 ATGGATCTTGAGTCTGTGATCTACAAGAACCCAAATAAGGAGCAATCATGGAAGACAGTGTTGATTCTGGCATATCAGAGCTTGGGGGTTGTCTATGGAGACTTGAGCACTTCCCCACTCTACGTTTACAAGAGCACCTTTGCTGAGGACATTCAGCATTCAGAAACCAATGAAGAAATCTATGGAGTTTTGTCCTTTGTGTTCTGGACTTTGACACTGATTCCTCTGTTCAAGTATGTGTTCATTGTGCTCCGAGCTGATGACAATGGTGAAGGAGGGACTTTCGCTCTGTACTCGTCGCTTTGCCGGCATGCCCGTATTAGCTTGTTGCCTAGCACTCAGCTTGCGGATGAGGATTTGACTCAGTACACTATTGATGGAGAAGTTCCTGTGGACAAGAAGAATGTTGGGTCGGGGTTGAAATCTTTGTTGGAGAAACATAGGGTGTTGCAGAGGGTTCTGCTTGTTCTGGCTTTGATTGGGACTTGCATGGTTATTGGAGATGGTGTTCTAACACCAGCAATTTCTGTTTTCTCTGCAGTGTCAGGTTTGGAGCTTTCCATGTCCAAAGAGCACCACAGATATGTGGAGGTTCCAGTTGCTTGTGTAATACTGCTATTTTTGTTTGCCCTTCAACATTATGGCACGCACCGCATGGGATATCTTTTTGCACCTGTTGTGCTGACCTGGCTGCTCTGCATAAGTTCTATTGGTGTTTATAATATCTTTCACTGGAATCCACATGTCTATGAAGCTCTCTCCCCATACTACATGTACAAATTTCTGAAAAAGACTCGAACGGGAGGATGGATGTCCTTGGGTGGGATTCTGTTGTGTATAACCGGTTCAGAAGCTATGTATGCTGATTTAGGACACTTTACACAATTGTCGATTCAGATTGCTTTCACCTTTTTGGTATACCCTTCTTTGATCCTAGCATACATGGGACAAGCTGCGTATCTTTCCAAGCATCATGAAAATGGAAGTGACTATCGAATCGGGTTTTATGTATCTGTACCTGAAAATCTTAGGTTGCCTGTTCTTGCAATAGCGATACTTCAAGCTGTGGTTGGAAGTCAAGCTGTCATCACAGGGACTTTCTCAATAATCAAACAATGTTGTGCTTTGGGATGTTTCCCCAAAGTCAAAATCATTCATACATCATCAAAGATACATGGCCAGATTTACATTCCTGAGATAAACTGGAGTTTGATGCTGCTTTGCCTGGCTATTACAATTGGATTTCGAGATACGAAACGCATGGGAAATGCTGCAGGTTTGGCTGTTATAACTGTCATGCTGGTGACCACTTGCCTAATGTCTCTAGTGATAGTCTTATGTTGGCACAAAAATGTTTGGCTTGCTATCTGCTTTATGTTGTTCTTTGGCTCCATTGAAGCACTTTATTTCTCTGCATCCCTCATCAAGTTCCTTGAGGGGGCTTGGGTCCCTATTGCCCTCTCACTCATCTTTCTAATTGTCATGTATGTGTGGCACTACGGCACAATGAAGAAGTATGAGTTCGATGTTCAAAACAAGGTCCCCATCAATTGGCTTCTGGGTTTGGGCCCCACTCTCGGAATTGTTAGGGTTAAGGGAATTGGCCTCATACATACTGAGCTTGTATCTGGGATCCCAGCTATTTTCTCTCACTTTGTTACCAATCTTCCTGCTTTCCATCAAGTTGTAATCTTCCTCTGCGTCAAATCTGTCCCGGTACCACATGTCAGACCTCAAGAAAGGTTCTTAGTGGGCAGAGTTGGCCCAAAGGAATATAGGCTTTATAGGTGCATAGCACGCTACGGCTACCGTGATGTTCACAAGGATGACCTTGAGTTTGAGAAGGATCTTGTTTGCAGTATAGCAGAATTTATCCGATCAGATACCTCTGAATATGGCTTAGGACTTGGAGACTTTGAAGATGATACAAAGATGGCAGTTGTTGGGACTTCAGCATCAAACTTGGAAGGTGTAAGGATGTCTGAAGACGGTGAGGATGATTCTCAAATGGAAGGCACTTCGGAGTTGAGGGAGGTTAAGTCTCCGGAAAAGGTGAGCAAGCGAGTGAGGTTTGTTGTGCCGGACAGTCCTCGGATTGATTTGGATGTAAGGGATGAGCTGCATGAGCTAATGGAAGCAAAGGAGGCAGGAATGGCATTTATAATGAGTCACTCATATGTGAGAGCAAAACGAGGATCAAGCTGGATAAAGAAAGTTGTTATCAATTTTGGGTATGATTTCTTAAGGAGAAACTCTAGAGGACCAACTTATGCTTTAAGTTTACCTCATGCTTCTACCCTAGAGGTTGGCATGATCTATCATGTCTAG 2328 0.436 MDLESVIYKNPNKEQSWKTVLILAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIYGVLSFVFWTLTLIPLFKYVFIVLRADDNGEGGTFALYSSLCRHARISLLPSTQLADEDLTQYTIDGEVPVDKKNVGSGLKSLLEKHRVLQRVLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEHHRYVEVPVACVILLFLFALQHYGTHRMGYLFAPVVLTWLLCISSIGVYNIFHWNPHVYEALSPYYMYKFLKKTRTGGWMSLGGILLCITGSEAMYADLGHFTQLSIQIAFTFLVYPSLILAYMGQAAYLSKHHENGSDYRIGFYVSVPENLRLPVLAIAILQAVVGSQAVITGTFSIIKQCCALGCFPKVKIIHTSSKIHGQIYIPEINWSLMLLCLAITIGFRDTKRMGNAAGLAVITVMLVTTCLMSLVIVLCWHKNVWLAICFMLFFGSIEALYFSASLIKFLEGAWVPIALSLIFLIVMYVWHYGTMKKYEFDVQNKVPINWLLGLGPTLGIVRVKGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVIFLCVKSVPVPHVRPQERFLVGRVGPKEYRLYRCIARYGYRDVHKDDLEFEKDLVCSIAEFIRSDTSEYGLGLGDFEDDTKMAVVGTSASNLEGVRMSEDGEDDSQMEGTSELREVKSPEKVSKRVRFVVPDSPRIDLDVRDELHELMEAKEAGMAFIMSHSYVRAKRGSSWIKKVVINFGYDFLRRNSRGPTYALSLPHASTLEVGMIYHV* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1713 775 Pfam K+ potassium transporter 25 605 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja2g1713 775 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 775 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja2g1713 775 PANTHER POTASSIUM TRANSPORTER 6 1 775 - -
Lja2g1713 775 TIGRFAM kup: potassium uptake protein 23 775 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1713 Lja-Chr2 17177771 17183986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1713 1 775 Inorganic Solute Cotransporters AT5G14880 76.913 0.0 1216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1713 K03549 - gmx:100793387 1386.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1713 2 17177771 17183986 Lja2g1713 2 17177771 17183986 ECH