Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1712 ATGGAGACGTTTAAGAAATCTCTCGCTATGATCATTCTCTCTTTTTTGTTTCTTGTTCTTTGTGATGTGTCTCTGGCGAGAAACGTGAAGACCACAAATCAGAACCAGAAGAGTACTTACATAGTACATGTTGCGAAATCCCAAATGCCAGAAAGCTTCGATCACCACTCGGCTTGGTTCGAATCGACTTTGAAGTCAGTTTCTGACTCAGCAGAAATGATCTACACTTATGACAAAGCTATTCATGGATTCTCAACAAGGTTAACACTAGAGGAAGCTCGTTTGTTGCAAAGCAGAAATGGGGTTCTAAAGGTGCTACCAGATGAAATCTACAAGCTCCATACAACTCGAACCCCACTGTTCCTCGGGCTCGATAAAATCACTGCAAGCACATTCACCCAATCCAAAATAGGACATAATGATGTCATCATCGGAGTCATAGACACAGGTGTTTGGCCTGAGAGCAAGAGCTTTGACGACACTGGGTACAGACCCATCCCCAACACCTGGAAAGGAAAATGCCAGGTAGGTGCGAATTTCACAACCGCCAACTGCAACAAGAAACTAATCGGTGCCAGGTTCTATAATAGTCACACCAAGTTCTATAACAATGGCTTGGTGGCCTCGGTGGGCCCAAATGATAATTCTATTGAGTCTCTCTCTCCGCGCGATGATGAGGGTCACGGAACCCACACTGCCAGCACTATTGCGGGCTCTCCGGTGCAAAATGCGAGCCTCTTCGGTTACGCTACTGGAACGGCGCGTGGCATGGCCCCACACGCTAGAGTTGCTGTCTACAAGGTTTGCTGGAAGAAGGGTTGTACTACTTCTGACGTATTGGCTGCGATAGACCAAGCCATCGTTGACAACGTGAATGTCATTTCCTTGTCGCTTGGAGGTAATCCATCCGATTACGACAAAGATAGCCTTGCAATTGCAGCGTTTTCGGCAATGGAGCATGGGATTGTTGTGTCTTGCTCCGGAGGGAACGATGGTCCTGATCCCTCTTCTATCACTAATGTGGCACCTTGGATTATCACGGTGGGAGCAGGCACAATCGATCGAGATTTCCCTGCTTACGTTAGCCTCGGAAATGGAAAAAACTATTCCGGTGTGTCTCTTTACGGTGGCAAAAAATTGCCAGATAAACCTGTTTTGCCACTCATCTTTGGAAAGGATTGTAAGTCAGGAAGCCTTTTGCTGCAAAAAGGCAAGGGAAAGATCGTGGTGTGTGATCGTGGATTATACGATGAGGTGTCGAAATCTATGGCGGTGAAATCCGCCGGCGGTTTGGGCATGGTGTTGGCCAACGACGCAGATGAGGCGGGGGATTTGGTGGCGGATCCATTTGTTTTGCCAGGACTTATGGTGGACGTAAAAGAAGGCGAAGCCATCAAGCAATACTTAACTTCTGATCCAAAACCGACAGCAACGATTGTGTTTGAGGGTACAAAGGTCGGGATCGAGCCTTCCCCTGTTGTTGCACTGTTCAGCTCTAGGGGCCCAAATCCTATCACCACAAAAATATTGAAGCCTGATTTGATCGCGCCAGGTGTCAACATCTTAGCTTCATTTACCAGGAATTCGAGTCCTTCTTCTTTAGATTCAGATGAAAGGCGAGTGGATTTCAACATCTTGTCAGGCACATCCATGTCATGCCCTCACGTGAGTGGGATTGCGGCTCTGGTCAAGTCCGTCCATCCAGATTGGAGCCCCGCCGCCATTCGATCTGCAATGATGACAACAGCTTATTCGACTTACAAGAATGGCAAGCCATTGTTGGACGGTGCAACTGGAAAACCAGGGACACCGTTTGATTTTGGCGCAGGACATGTGGACCCTATCCCTGCACTCAATCCAGGGCTTATTTATGATTTGACGGCGGATGATCATCTGAATTTTCTCTGTTCGTTAAACTACACGCCCGAAATGATTGAAGTCGTGGCGAAGAGAAAATACGTGTGTGATGGAAAGATACACTACTTTAATTACCCTTCATTTGCTGTGATTTTTGAAGCTGGTGACAATGGTACACAGGTTAAGCAAATGCGAACTCTCACCAATGTGGGTGCTACGGGAACGTACAAGGTATCAGTTCAGACAAATATCCCAGGCATCAAGATTAGAGTTGAACCGGAAGTGTTGAGTTTTGGAGTAAAAGAAAAAAAGTCCTATACAGTTACATTCAACGCATCAGGTGTGAAGCCGCAGAAAACTCCAGGTTTTGGACGTTTGGAATGGTTTAATGGAAAGAACGTTGTTCGAAGTCCTATCTTATTTAGTTGGGATCAATGA 2295 0.4649 METFKKSLAMIILSFLFLVLCDVSLARNVKTTNQNQKSTYIVHVAKSQMPESFDHHSAWFESTLKSVSDSAEMIYTYDKAIHGFSTRLTLEEARLLQSRNGVLKVLPDEIYKLHTTRTPLFLGLDKITASTFTQSKIGHNDVIIGVIDTGVWPESKSFDDTGYRPIPNTWKGKCQVGANFTTANCNKKLIGARFYNSHTKFYNNGLVASVGPNDNSIESLSPRDDEGHGTHTASTIAGSPVQNASLFGYATGTARGMAPHARVAVYKVCWKKGCTTSDVLAAIDQAIVDNVNVISLSLGGNPSDYDKDSLAIAAFSAMEHGIVVSCSGGNDGPDPSSITNVAPWIITVGAGTIDRDFPAYVSLGNGKNYSGVSLYGGKKLPDKPVLPLIFGKDCKSGSLLLQKGKGKIVVCDRGLYDEVSKSMAVKSAGGLGMVLANDADEAGDLVADPFVLPGLMVDVKEGEAIKQYLTSDPKPTATIVFEGTKVGIEPSPVVALFSSRGPNPITTKILKPDLIAPGVNILASFTRNSSPSSLDSDERRVDFNILSGTSMSCPHVSGIAALVKSVHPDWSPAAIRSAMMTTAYSTYKNGKPLLDGATGKPGTPFDFGAGHVDPIPALNPGLIYDLTADDHLNFLCSLNYTPEMIEVVAKRKYVCDGKIHYFNYPSFAVIFEAGDNGTQVKQMRTLTNVGATGTYKVSVQTNIPGIKIRVEPEVLSFGVKEKKSYTVTFNASGVKPQKTPGFGRLEWFNGKNVVRSPILFSWDQ* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1712 764 CDD Peptidases_S8_3 111 584 IPR034197 -
Lja2g1712 764 Pfam PA domain 404 465 IPR003137 -
Lja2g1712 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 762 IPR045051 -
Lja2g1712 764 Gene3D Peptidase S8/S53 domain 141 630 IPR036852 GO:0004252|GO:0006508
Lja2g1712 764 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 28 762 - -
Lja2g1712 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 114 IPR037045 -
Lja2g1712 764 SUPERFAMILY Subtilisin-like 113 622 IPR036852 GO:0004252|GO:0006508
Lja2g1712 764 Pfam Fibronectin type-III domain 662 759 IPR041469 -
Lja2g1712 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 548 558 IPR023828 -
Lja2g1712 764 Gene3D - 354 487 - -
Lja2g1712 764 Pfam Subtilase family 140 610 IPR000209 GO:0006508|GO:0008236
Lja2g1712 764 CDD PA_subtilisin_like 360 479 - -
Lja2g1712 764 MobiDBLite consensus disorder prediction 213 235 - -
Lja2g1712 764 ProSiteProfiles Serine proteases, subtilase domain profile. 121 618 - -
Lja2g1712 764 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Lja2g1712 764 PRINTS Subtilisin serine protease family (S8) signature 547 563 IPR015500 -
Lja2g1712 764 PRINTS Subtilisin serine protease family (S8) signature 224 237 IPR015500 -
Lja2g1712 764 Pfam Peptidase inhibitor I9 39 114 IPR010259 -
Lja2g1712 764 Gene3D - 635 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1712 Lja-Chr2 17160395 17162689 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1712 3 762 Subtilisin-like Serine Gene Family AT5G67360 59.690 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1712 - - gmx:100801866 957.977