Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1708 ATGGCACGAACAAGATCCTTCTACAAAGATGTTCTACCAGTTGTGGTGATTATAGGCAACGAATTCAATGACATGGGCACACTCACTCTGTTCAAAGCAGCCACACTTCAAGGGATGAACAACCATGTCTTTCTTGCCTATGCTTATGCTGTTGCTACCACTATACTCTTACCTGTGCTTTATCTCAACAGAAGGTCAAGAGTGCTTCCTCCACTCAGTTTCTCCATAATTTCCAAGATAGTTCTTCTTGGAGCACTAGGGAGTACATCCCAGATTCTGGGATATGCTGGAGTCAATTACAGTTCTCCAGCACTTGCTTCATCAATTGCTAATCTGGTACCTGCTTTCACTTTCATGCTTGCTGTCACCTTCAGGATGGAAAAATTAGCTGCAAAAAGAAGAAGTAGTCAAGCTAAGGTATTGGGAAGCATAATATCAATAGCTGGTGCATTTGAATTGACTTTCTACAAAGGTCCATCGGTCATCAATGGTCATACCCGTCTAACCTCATTACTTGATCAACGATTTCGCTTTCTTAAATCTGACTCTGAGGATGCAATTTGGGCCATTGCTGGCATTCTACTGACAGCTGACTATTTCCTAGCATCACTATGGTACATTTTGCAGGTGCATATCTTGAATGAGTTCCCGGATGAACTAACTATAGTCTTCTTTTACAACGTGACTGCCACCATCATATCCGTAACTGTAGGTTTATTAGCAGCGCCAAATGCAACTGCTTGGAAGATAGGACTAGATATTTCACTGGTCTCCATTGTTTGCTCTGGAATATTTGGGAAATTAATGAGCAATGTTATTTACACCTGGTCAGTGGGCTTAAAAGGACCTGTGTATGTAACATCATTCAAGCCATTCCAAATTGTCATTGCTGTTGGGATGGGTGTTATTTTCCTTGGTGATACTCTTCATCTTGGGAGTATTATTGGAGCTACAATAATATCAATTGGCATGTATGCTGTATTGTGGGGCAAAGCAAAAGAAGAGATAGAAGAAGATGTTGGTAGCCTGGAATCAGTAACTACAGAGAATGTACCTCTCTTGCATAGCTACATATCTGAAACTTTTGAAAAGAAGACAGATGGAAATGTTTAG 1113 0.407 MARTRSFYKDVLPVVVIIGNEFNDMGTLTLFKAATLQGMNNHVFLAYAYAVATTILLPVLYLNRRSRVLPPLSFSIISKIVLLGALGSTSQILGYAGVNYSSPALASSIANLVPAFTFMLAVTFRMEKLAAKRRSSQAKVLGSIISIAGAFELTFYKGPSVINGHTRLTSLLDQRFRFLKSDSEDAIWAIAGILLTADYFLASLWYILQVHILNEFPDELTIVFFYNVTATIISVTVGLLAAPNATAWKIGLDISLVSIVCSGIFGKLMSNVIYTWSVGLKGPVYVTSFKPFQIVIAVGMGVIFLGDTLHLGSIIGATIISIGMYAVLWGKAKEEIEEDVGSLESVTTENVPLLHSYISETFEKKTDGNV* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1708 370 PANTHER WAT1-RELATED PROTEIN 5 357 - -
Lja2g1708 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 153 - -
Lja2g1708 370 Pfam EamA-like transporter family 26 151 IPR000620 GO:0016020|GO:0016021
Lja2g1708 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 332 - -
Lja2g1708 370 PANTHER WAT1-RELATED PROTEIN 5 357 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1708 Lja-Chr2 17127188 17130526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1708 1 360 Nodulin-like Gene Family AT3G28050 48.257 2.18e-114 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1708 - - gmx:100790743 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1708 2 17127188 17130526 Lja2g1708 2 17127188 17130526 ECH
Lja1g1933 1 22139394 22143504 Lja2g1708 2 17127188 17130526 ECH