Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1693 ATGGAAATCAACTTTACATCAAGAAGAATCATTAAACCTTCATTGCCAACTTCTAATGAATGTCAAACCTACAAACTATGTTTGTTTGATGTGTTTCAACTCAACACCTATTTCCCATTAATCCTATTTTACAGCAAAACCAATGACATGCCAGGATTCTCAGAAGTTTCAGCTCTACTACAAAAATCACTATCTGAGGCATTAACCATTTTCTACCCTCTTGGAGGTAGAAGAAGTGATTGCTCCTCCATCAATTGCAATGATGAAGGTGCAATTTACTCTGAAGCCTCAATAAATATCACCATGGAAGAGTTTCTCAAACCACCAAAATTAGAATTGGTAAACAAATTGCTTCCATGTGAGCCAAACAAGGTGCACCCCTATCAACAAGTCTTGCCACAACTACTAGTCCAAGTGAACATTTTCAAGTGTGGAGGCATAGCTATTGGTTTGTGCAATCTCCACACAATCCTAGATGCATGTTCATGCAGTGCCTTCTTGAAAACTTGGTTTGCTATGTGTAAAGGAACAAGAGATGAAATAGCATGGCCAGATTTTTCTTCAGCTTCTTCTCTCTTCCCTCCAAGAAACACGTTCGGTGTACGCGCTGGTGTGTTGAATATGAGCAAAGGCTCAGAGATTGAATTGAAGTGCACCACAAGAAGGTTCTTGTTTGATGCCAAATCTATCAATGACCTCAAAGCCATGATAGAAAATGATGGGATCTACACAAAGGCTACACGTTACGAGGCGGTGTCTTCATTCATATGTAAACACATGATTGTAGCATGCATGAAGGAACTCTGTGACAGAACAAGGCCACTGGTTGTCTTACATGTTGTGGACATGAGGAGAAGGATGGGGGAGCCATTCTCACAAAATTCTATAGGGAACTTGTTGTGGCCTGCACTGGTGGTTTATGAGAATGCTGATAAGAACATTGATATTAGAGATTTGGTTATGAATTTGCAACAAGGAATTGGAAAGCTCACTAAGGAATTGTTTCTAAAATTGCAGAATGATCCTGGTTTTTTGTGGAGTGATGAGTGTGCGGATTTAATGCTTGAAGGGGTAGCCACCAGAAATCCAATTTCATTTGTGTTCACAAGTTGGGCTAATATGGGATTCAAAGAATTGAACTTTGGTTGGGGAAAGCCTTTATGGCTGGCTCAAAGAGGAGGTACTAAGGAAGCTATTCCAAACACAGTAGTGTTGATGGAAAGCGATGAGGGGATTGAGGCATGGGTGACAATGGAAGAGAAACATCTGACTATCATGGAAAATGATATGGACTTCCTTAGATTAGCTTTGCTTAATCCTAATGTTTCAAACATATAA 1338 0.3984 MEINFTSRRIIKPSLPTSNECQTYKLCLFDVFQLNTYFPLILFYSKTNDMPGFSEVSALLQKSLSEALTIFYPLGGRRSDCSSINCNDEGAIYSEASINITMEEFLKPPKLELVNKLLPCEPNKVHPYQQVLPQLLVQVNIFKCGGIAIGLCNLHTILDACSCSAFLKTWFAMCKGTRDEIAWPDFSSASSLFPPRNTFGVRAGVLNMSKGSEIELKCTTRRFLFDAKSINDLKAMIENDGIYTKATRYEAVSSFICKHMIVACMKELCDRTRPLVVLHVVDMRRRMGEPFSQNSIGNLLWPALVVYENADKNIDIRDLVMNLQQGIGKLTKELFLKLQNDPGFLWSDECADLMLEGVATRNPISFVFTSWANMGFKELNFGWGKPLWLAQRGGTKEAIPNTVVLMESDEGIEAWVTMEEKHLTIMENDMDFLRLALLNPNVSNI* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1693 445 PANTHER F21J9.9 1 442 - -
Lja2g1693 445 Pfam Transferase family 1 432 - -
Lja2g1693 445 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 442 - -
Lja2g1693 445 Gene3D - 216 435 IPR023213 -
Lja2g1693 445 Gene3D - 1 203 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1693 Lja-Chr2 16956300 16957637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1693 1 427 Monolignol Biosynthesis Gene Families AT5G48930 22.101 1.31e-18 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1693 - - gmx:102667966 689.493