Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1692 ATGGCATCATCACCATCATCATCACTCTTCCTCCTCCTCTCAACACTCTCATTCTTCACCACCCTCTCACACGCGCGACTCACACTCGACTTCTACAAACACACGTGCCCACAATTCTCCCAAATCATCCGCGACACCGTCACCAACAAACAAATCACCACCCCCACCACCGGCCCCGCCACGCTCCGCCTCTTCCTCCACGACTGCCTCCACCCCAACGGCTGCGACGCCTCCATCCTCCTCTCCTCAACTTCCTTCAACAAAGCCGAACGCGACGCCGACATCAACCTCTCCCTCCCCGGCGACGCCTTCGACCTCGTCGTCCGAGCTAAAACCGCCCTCGAACTCGCTTGCCCCAACACCGTCTCCTGCGCCGACATCCTCACCGCCGCCACCAGCGACCTCTTAACCATGCTCGGCGGCCCTCACTTCCCCGTCTTCCTCGGCCGCCGCGACGGCCAATCCTCCCTCGCCTCCTCCGTCGACGGCCACCTACCTAAACCCACCATGCCCATGTCACAAATCGTCCAGATCTTCACCCAGCGCGGCTTCACCGTTGAAGAAATGGTCGCTCTCTCCGGCGCACACACCATCGGATTCTCCCATTGCAAGGAGTTCACCGCCGACATCTACAACTCCTCCTCCGCCGCCGGTTACAACCCTCGTTTCGCCCAGGGTTTACAGAAAGCATGTGCAAATTACCAAACTAACCCCACCTTGTCCGTGTTCAATGACATTATGACCCCTAACAAGTTCGACAATGTCTACTTCCAAAACCTTCCAAAAGGGTTAGGACTATTGAAATCCGATCAAGGGTTGTTCAGTGACGCCGTCACGAAGCCGTTTGTCGCGAAATTCGCGGCAGATCAGAACGAGTTCTTCCGGGTGTTTACCCGGGCAATGCAGAAGCTCAGTCTATTAGGAGTGAAAACTGGGAGGAGAGGTGAGATCAGACGCAGGTGTGATCAGGTTAATTGA 978 0.5654 MASSPSSSLFLLLSTLSFFTTLSHARLTLDFYKHTCPQFSQIIRDTVTNKQITTPTTGPATLRLFLHDCLHPNGCDASILLSSTSFNKAERDADINLSLPGDAFDLVVRAKTALELACPNTVSCADILTAATSDLLTMLGGPHFPVFLGRRDGQSSLASSVDGHLPKPTMPMSQIVQIFTQRGFTVEEMVALSGAHTIGFSHCKEFTADIYNSSSAAGYNPRFAQGLQKACANYQTNPTLSVFNDIMTPNKFDNVYFQNLPKGLGLLKSDQGLFSDAVTKPFVAKFAADQNEFFRVFTRAMQKLSLLGVKTGRRGEIRRRCDQVN* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1692 325 Gene3D Peroxidase, domain 2 166 304 - -
Lja2g1692 325 SUPERFAMILY Heme-dependent peroxidases 27 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja2g1692 325 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g1692 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g1692 325 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g1692 325 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g1692 325 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g1692 325 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g1692 325 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g1692 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g1692 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g1692 325 PANTHER PEROXIDASE 31 6 325 - -
Lja2g1692 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Lja2g1692 325 CDD secretory_peroxidase 27 324 IPR033905 GO:0004601|GO:0042744
Lja2g1692 325 Pfam Peroxidase 47 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g1692 325 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g1692 325 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g1692 325 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g1692 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g1692 325 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g1692 325 ProSiteProfiles Plant heme peroxidase family profile. 26 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g1692 325 PANTHER - 6 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g1692 325 Gene3D - 30 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1692 Lja-Chr2 16952155 16953510 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1692 23 325 Peroxidase AT3G28200 65.347 1.26e-151 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1692 K00430 - gmx:100817030 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1692 2 16952155 16953510 Lja2g1692 2 16952155 16953510 ECH