Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1683 ATGAACAATCAATTTATCTTTATATCTTTCTTTCTTTATTTTTTGTTTTATCCCTTTTCTCTCCTAGGGTTCCGAGCTCTGGTAGTGAACCTCCTACCATTCCTTCACTATCATTATCGTCCCTCCAATTCCAAAGAGCCTACCCTAGCACCGGGTGCATGGCCAATACTCGGTCACCTAATTCCACTATTTGCCGCTAATTCACAAAAACCGCCACACAAAATCTTGGGTTCCTTGGCCGACCAATATGGTCCTTTGTTCACTATCAAGCTCGGTACCGCACGTGCCGTGGTACTCAGCAACTGGGAAATGGCCAAAGAATGCTTCACCACAAACGACATCATTGTTTCGTCTCGTCCCACCCTCATCGCGACGCAACAAATGGGCTACAACGGAGCCATGTTCGGCCTGGCACCATACGATCCTTACTGGCGCGAGCTCCGGAAAATCATAACTCTAGAGATCCTTTCCGGTCGCCGCGTTGAGCAACTCGGCCATGTCCGTGTCTCCGAAGTTCAAACCTCAATCAATGAGCTGTACTATGTTTGGTGTAGCAAAAAGAATGAGGAGTCTGGTTACATGTTGGTGGAGTTGAAGCAGTGGTTTACAGAGGTGACGTTCAACATGGTTCTTCGGATGGCTGTTGGCAAGCGCTATATTGGTGGTGCCGGCGTGGTTGGGGAGAGTTGTGTGAGTGCTTTGAGGAAGTTCATGCGTTTGATGGGGTTGTTCACGGTGGGAGATGCGGTTCCTTGGTTGAGATGGTTTGATTTTGGTGGACATGTGAAGGAGATGAAGGAAACTGCTAAGGAGTTGGACAGAGTTGTAGGGGAGTGGCTAGAGGAGTACCGGCGGCAGAGGGCCATGTTGGGCGAAAAGGTTGACCGTGATGATGAACAAGACTTCATGGACATCATGATTTCATTGGTTGATGGAACAACAATTGATGGGTTTGATGGTGATACCATCATCAAAGCCACAGTCCTGACATTATTTTTAGGAGGAGCTGAGACAACCACTGTGACCCTTACATGGGCAATATGTTTGTTACTAAAAAATCCTCACATATTGGAAAAAGCAAAAGAAGAACTCAATACTAAAGTTGGTAAAGACAAATGCATAAGTGAGTCAGATTTAAGCAAGTTGGTGTATCTTCAAGCCATAGTCAAAGAAACACTAAGATTGTGTCCACCGGGACCTCTTTCAGCACCTCTCAAAAAGGGAACTCGACTCATAACAAATCTTTGGAAGATCAACACCGATGCAAGTGTTTGGCCAGATCCATTGGATTTCAAACCAGAAAGGTTCCTTACAACTCATAAAGATGTTGATGTTAGGGGTCATCATTTCGAGTTGTTACCATTTGGATGTGGTAGGAGGATTTGTCCTGGAATATCATTTGGCCTACAAATGGTTCATTTTACTCTGGCTAGTTTTTTGCATTCCTTTGAAATCTTGAATCCATCCGGTGAGCATGTTGACATGACTGAATCCTTTGGATTGACCAACGCCAAAGCTACTCCACTTGAGGTTCTTGTTAAACCAAGTTTGTCTACAAATTGTTATGAAACCAAGTAA 1578 0.4468 MNNQFIFISFFLYFLFYPFSLLGFRALVVNLLPFLHYHYRPSNSKEPTLAPGAWPILGHLIPLFAANSQKPPHKILGSLADQYGPLFTIKLGTARAVVLSNWEMAKECFTTNDIIVSSRPTLIATQQMGYNGAMFGLAPYDPYWRELRKIITLEILSGRRVEQLGHVRVSEVQTSINELYYVWCSKKNEESGYMLVELKQWFTEVTFNMVLRMAVGKRYIGGAGVVGESCVSALRKFMRLMGLFTVGDAVPWLRWFDFGGHVKEMKETAKELDRVVGEWLEEYRRQRAMLGEKVDRDDEQDFMDIMISLVDGTTIDGFDGDTIIKATVLTLFLGGAETTTVTLTWAICLLLKNPHILEKAKEELNTKVGKDKCISESDLSKLVYLQAIVKETLRLCPPGPLSAPLKKGTRLITNLWKINTDASVWPDPLDFKPERFLTTHKDVDVRGHHFELLPFGCGRRICPGISFGLQMVHFTLASFLHSFEILNPSGEHVDMTESFGLTNAKATPLEVLVKPSLSTNCYETK* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1683 525 PANTHER CYTOCHROME P450 82A2 26 523 - -
Lja2g1683 525 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1683 525 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1683 525 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1683 525 PANTHER CYTOCHROME P450 82C3-RELATED 26 523 - -
Lja2g1683 525 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1683 525 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1683 525 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1683 525 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1683 525 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1683 525 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1683 525 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1683 525 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1683 525 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1683 525 SUPERFAMILY Cytochrome P450 51 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1683 525 Pfam Cytochrome P450 51 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1683 525 Coils Coil 262 300 - -
Lja2g1683 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Lja2g1683 525 Gene3D Cytochrome P450 36 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1683 Lja-Chr2 16870468 16872390 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1683 52 522 Cytochrome P450 AT4G31940 46.761 4.69e-160 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1683 - - gmx:100805047 691.419