Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1682 ATGGACTTACTTTCAAGTTCCCTAATTAACTCTACTTCAATTGCACTCCTTTCTGTAATAATCTTCTTGTTCTTGTTCCTTCACTATCATTTTCGTCCTTCCAATTCCAAAGAGCCTCCATTAGCTGCTGGTGCATGGCCAATACTCGGTCACCTAATCCCACTATTTGCTGCTAATATACAAAAACCGCCACACAGAACCTTGGGTGCCTTAGCGGACCGGTATGGACCCTTATTCACCATCAAGCTCGGCACCACGCGCGCCGTGGTACTTAGCAACTGGGAAATAGCCAAAGAGTGCTTCACCACAAACGACATCATCGTTTCGGCTCGTCCCAAACTCGTCGCGACGCAACACATGGGCTACAACGGAGCCATGTTTGGCCTCTCCCCTTACGGTCCTTATTGGCGCGAGCTACGTAAAATCACAACTCTAGAGATCTTTTCCAACCGCCGCGTCGAGCAACTCGGCTATGCTCGTGTCTCTGAAGTTCAAACCTCAATCAAAGAGCTGTACAATGTTTGGTGTAGCGAAAAGAACAAGGAGTCTGATTATGTGTTGGTGGAGTTGAAGCAATGGTTTTACGAGGTGACGTTCAACATGGTTCTTCGGATGACCGTTGGGAAGCGATATTTCAGTTCTGCTGGCGTGGTTAGGGAGCGTTGTGTGAGTGCTTTGAAGGAGTTTTTGCGCTTGATGGGGGTGTTCACGGTGGGAGATGCGGTTCCTTGGTTGAGATGGTTTGATTTTGGTGGACATGTTAAGGAAATGAAGGACAATGCTAAGGAGTTGGACAATGCTATGAGTGAGTGCTTAGAGGAGCACAAGCAGCATAGGGCCATGTTGGGTGAAAAGGTTGGTCGTGATGATCAAGACTTCATGGATGTCATGATTTCACTGCTTGATGGAACAACAATTGAGGGGTTCGATGCTGATACTATAATCAAAGCCACAGTACTGGCAATATTTTTAGGAGGAGTTGAGACAACCACTGTGACCCTTATATGGGCAATATGTTTGATACTGAGAAATCCTCACGTATTGAAAAAAGTAAAAGAAGAACTCAACACTCAAGTTGGTAAAGGCAAATGCATAAGTGAGTTAGATATAAGTAAGTTGGTGTATCTTCAAGCCACAGTCAAAGAAGCACTGAGATTGTATCCAGCCACCCCTCTTTCAACACCTCGTGAGTTTTCAGAGAATTGCAATTTAGGCGGCTACCAAGTTAAAAAGGGAACTCGACTCATAACAAATATTTGGAAGATCAACACCGATCCAAGTGTTTGGCCAGATCCATTGGATTTCCAACCAGAAAGGTTCCTTACAACTCATAAAAATGTTGATGTTAGGGGTCATCATTTTGAGTTATTACCATTTGGATGTGGTAGGAGAATTTGTCCTGGAATATCATTTGGCCTGCAAATGGTTCAATTAACTCTGGCTAGTTTTTTGCATTCCTTTGAAATCACGAATCCAATAGGTGAGCTTGTTGACATGACTGAATCCTCTGGAATGACCAATGCCAAAGCTACTCCACTTGAGGTTCTTGTTAAACCACGTCTGTCTCCAAATTGTTATGAAAACATGTAA 1590 0.439 MDLLSSSLINSTSIALLSVIIFLFLFLHYHFRPSNSKEPPLAAGAWPILGHLIPLFAANIQKPPHRTLGALADRYGPLFTIKLGTTRAVVLSNWEIAKECFTTNDIIVSARPKLVATQHMGYNGAMFGLSPYGPYWRELRKITTLEIFSNRRVEQLGYARVSEVQTSIKELYNVWCSEKNKESDYVLVELKQWFYEVTFNMVLRMTVGKRYFSSAGVVRERCVSALKEFLRLMGVFTVGDAVPWLRWFDFGGHVKEMKDNAKELDNAMSECLEEHKQHRAMLGEKVGRDDQDFMDVMISLLDGTTIEGFDADTIIKATVLAIFLGGVETTTVTLIWAICLILRNPHVLKKVKEELNTQVGKGKCISELDISKLVYLQATVKEALRLYPATPLSTPREFSENCNLGGYQVKKGTRLITNIWKINTDPSVWPDPLDFQPERFLTTHKNVDVRGHHFELLPFGCGRRICPGISFGLQMVQLTLASFLHSFEITNPIGELVDMTESSGMTNAKATPLEVLVKPRLSPNCYENM* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1682 529 Coils Coil 254 274 - -
Lja2g1682 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Lja2g1682 529 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1682 529 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1682 529 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1682 529 Gene3D Cytochrome P450 28 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1682 529 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1682 529 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1682 529 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1682 529 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1682 529 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1682 529 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1682 529 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1682 529 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1682 529 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1682 529 Pfam Cytochrome P450 43 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1682 529 PANTHER CYTOCHROME P450 82C3-RELATED 1 527 - -
Lja2g1682 529 SUPERFAMILY Cytochrome P450 45 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1682 529 PANTHER CYTOCHROME P450 82A2 1 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1682 Lja-Chr2 16863271 16865208 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1682 19 526 Cytochrome P450 AT4G31940 46.139 7.04e-171 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1682 - - gmx:100803451 707.983