Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1680 ATGGATTCAGCTCTAAACTGCTTAAACGCCACTACATTAATCACTGCACTCCTTTCCCTAATCTTCCTTTATTTCTTTCTCTACCGCCCCTCCAAACCCACTCATCATCCCAAACAGCCTCCGTCCGCCGCCGGTGCATGGCCAATCCTCGGCCACCTACATCTCTTAAGAAACTCACAAACACCCCACAGAACCTTAGGCGCCATGGCCGACAACCACGGCCCTATATTCACCATCAAAATCGGCACCGCAACCACCTTAGTACTCAGCAACTGGCAAATGGCCAAAGAATGCTTCACCACAAACGACACCGCCGTTTCCTCCCGCCCCACCCTCATCTCCATGGAACACATGTCGTACAACAAAGCCATGTTCGGCTCTGCACCTTACGGCCCTTACTGGCGCCGCCTCCGCAAGATCGCCACGCTCGAGATCCTCCACAACCGCCGTGTCGAGCAGTTGCGCCACGTCCGCGTTTCAGAAGTTCAAACCTCCATCAAAGAGCTCTACGACGTTTGGTCTGCCGCCACGAAGAACGACGTGTCCGGCGGCGGTTATGCGATGGTGGAGGTGAAGCAGTGGTTTTATCAGGTGACGTTCAACATGATTCTTAGGATGGCGGTTGGGAAGAGGTATTTTGGTGGGGCGGGTGTTGTTGAAGAGGGGGAGGTGCGGAGGTGTGTGGAGGCGTTGACAGAGTTCATGCGGTTGCTGGCGGTGTTTACGGTGGCGGATGCTGTTCCTTGTTTGAGGTGGTTTGATTTTGGTGGACATGAGAAGGAGATGAAGGAGATTGCTAAGGAGTGGGATAGGATTTTGAGTGGGTGGTTGGAGGAGCACCAAAACAAGAGGACTTTGGGTGGAAAGGATGGACTGGATGGTGGCGGCGACCAAGACTTCATGGATGTGATGATTTCAGTGCTTGGTGACACCAAGATTGAGGGAATTGATGCTAACACCACAATCAAAGGCACAATATTGACATTATTTGTGGGAGGAATTGACACGAGCTCCATCACTCTTTCATGGGCAATATATTTGCTATTGAGAAATCCTATAATATTGGAGAAAGTAAAACAAGAACTCAATCATCAAATTGGAAAAGATAGATGCGTGAGTGAGTCAGACATAAGCAAATTGGAGTATCTTCAAGCCATAGTGAAGGAGACGTTGAGGTTGTATCCACCAGCCCCTCTCTCAGGCCCTCGTGAAGTCACTGATAATTGCACTTTAGGTGGCTATCATGTGAAAAAAGGAACTCGACTCATCACAAATCTTTGGAAGATTCACACAGATCCTAGTGTTTGGCCAGATCCATTGGAGTTCAGACCAGAGAGGTTCCTTACAACACACAAAGATGTAGATGTCAGGGGTTGTCATTTTGAGTTGTTGCCATTTGGTGGTGGGAGAAGGATTTGTCCAGGAATATCCTTTGCTCTTCAAATAGTTCATTTCTCTCTGGCTAGTTTTTTGCATTCCTTTGAAATCTTGAATCCTTCTAACAAACCTGTTGATTTGACTGAAAGTTATGGATTGACCAACATCAAAACTGCCCCGCTTGAGATTCTGGTTAAACCATGTTTGCCTCCAAACTGTTATGGAACAAAGTGA 1611 0.4798 MDSALNCLNATTLITALLSLIFLYFFLYRPSKPTHHPKQPPSAAGAWPILGHLHLLRNSQTPHRTLGAMADNHGPIFTIKIGTATTLVLSNWQMAKECFTTNDTAVSSRPTLISMEHMSYNKAMFGSAPYGPYWRRLRKIATLEILHNRRVEQLRHVRVSEVQTSIKELYDVWSAATKNDVSGGGYAMVEVKQWFYQVTFNMILRMAVGKRYFGGAGVVEEGEVRRCVEALTEFMRLLAVFTVADAVPCLRWFDFGGHEKEMKEIAKEWDRILSGWLEEHQNKRTLGGKDGLDGGGDQDFMDVMISVLGDTKIEGIDANTTIKGTILTLFVGGIDTSSITLSWAIYLLLRNPIILEKVKQELNHQIGKDRCVSESDISKLEYLQAIVKETLRLYPPAPLSGPREVTDNCTLGGYHVKKGTRLITNLWKIHTDPSVWPDPLEFRPERFLTTHKDVDVRGCHFELLPFGGGRRICPGISFALQIVHFSLASFLHSFEILNPSNKPVDLTESYGLTNIKTAPLEILVKPCLPPNCYGTK* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1680 536 PANTHER CYTOCHROME P450 82A2 1 534 - -
Lja2g1680 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Lja2g1680 536 Gene3D Cytochrome P450 28 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1680 536 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1680 536 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1680 536 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1680 536 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1680 536 SUPERFAMILY Cytochrome P450 41 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1680 536 Pfam Cytochrome P450 43 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1680 536 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1680 536 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1680 536 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1680 536 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1680 536 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1680 536 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1680 536 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1680 536 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1680 536 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1680 536 PANTHER CYTOCHROME P450 82C3-RELATED 1 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1680 Lja-Chr2 16847568 16849950 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1680 11 526 Cytochrome P450 AT4G31940 48.184 2.38e-179 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1680 - K23136 gmx:100805047 693.345