Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1665 ATGGATCACCGGAGCAACACTCCCTCACTCCTCTTCCTATTCACCTTGTTGGGTATCTGCATCTCGCTCGCTTCATCGCAGGTTGAAGACGACGTGAGATGCTTGAAGGGCATCAAGGACACTGTCAAGGACCCCGGTAATCGCCTCGAGACGTGGCGGTTCGACAACACCACCGTGGGTTTCATCTGTGACTTCGTCGGCGTCGACTGCTGGAACCTCCGGGAGAATCGAGTTCTGGGTTTGCAGCTTCAGGACTTCAAGCTTTCTGGTCAGATCCCGGAGTCTCTGAAGTACTGTGGGAAGAATCTGCAGAAACTGGTTCTTGGGTCGAACTCGTTTACCTCGGTGATTCCAGCTGAGATCTGTAGTTGGATGCCGTTTTTGGTAACTATGGATTTGTCTGGTAATGATCTCTCTGGGCCTATTCCATCTACTCTTGTGAATTGTTCTTATTTGAATGAGTTGGTGTTGTCTGATAATCATCTTTCTGGTTCTATTCCTTATGAGTTTGGGAGTTTGGGTAGGCTTAAGAGGTTTTCTGTGGCTAATAATAAGCTTAGTGGGAGTATTCCTGAGTTTTTCAGTGGGTTTGATAAGGAGGATTTTGCTGGGAATAGTGGGTTGTGTGGGGGTCCTCTTTCTAAATGTGGTGGGATGAGTAAGAAGAATCTTGCTATTATTATTGCTGCTGGGGTGTTTGGTGCTGCTGCTTCTTTGCTTTTGGCTTTTGGGTTGTGGTGGTGGTATCATTTGAGGTTGAGTGGTGGTGGTGGTGGGAGGAGGAAAGGAGGGTATGAGGTTGGGGGGGTTGATGATTGGGCTGTGAGGTTGAGGGGGCATAAGCTTGCTCAGGTTACTCTTTTTCAGAAGCCGATTGTGAAGGTGAAGCTTGGGGATTTGATGGCTGCGACTAATAATTTCAGTGCTGAGAATGTTCTGATTGCCACGAGGACAGGGACTACTTACAGGGCTGATCTTTCGGATGGCTCCACGCTCGCGGTGAAGCGGCTGAACACGTGTAAGATTGGGGAGAAGCAGTTTCGGATGGAGATGAATCGGCTAGGCCAAGTTAGGCATCCGAATTTGGCGCCTTTGCTGGGGTACTGTGTTGTGGAAGAGGAGAAGCTGCTGGTTTATAAGCACATGTCCAACGGGACTCTCTATTCGTTGCTGCATAAGAATAACGAGTTGGATTGGCCGATGAGGTTCAGGATAGGGTTGGGCGCGGCTAGGGGCCTCGCTTGGCTGCACCACGGGTGCCATCCTCCGATTATACAGCAAAATGTTTGTTCCAATGTGATTCTTGTTGATGAAGAATTCGATGCGCGGTTAATGGACTTTGGACTCGCAAGGCTTATGACATCGGACGCTAATGGTAGTTTTGTGAATGGGGATCTAGGGGAGCTCGGGTATATCGCTCCGGAATATCCAAGTACTCTGGTTGCTTCATTGAAAGGGGATGTGTATGGATTCGGAGTTTTGCTTTTGGAGTTGGTCACGGGGTGCAAGCCTCTTGAGGTGAGCGCCGCCGACGAGGAAGAATTTAAGGGTAGCCTAGTGGATTGGGTGAATATGCATTCTAGTTCCGGTAGACTCAAGGATTGCATTGATAAAGCCATATCTGGAAGGGGACATGATGAGGAGATTGTGCAGTTTCTGAAAATCGCATCTAATTGTGTGCTTTCTCGCCCCAAGGATAGGTGGTCTATGTACCAGGTTTATCATGCGTTGAAGAATTTATCGAAAGACCACAGTTTCTCTGAACATGATGATGAATTTCCCTTGATCTTTGGTAAGCCAGAAAATGAACCAGCTTAG 1818 0.4818 MDHRSNTPSLLFLFTLLGICISLASSQVEDDVRCLKGIKDTVKDPGNRLETWRFDNTTVGFICDFVGVDCWNLRENRVLGLQLQDFKLSGQIPESLKYCGKNLQKLVLGSNSFTSVIPAEICSWMPFLVTMDLSGNDLSGPIPSTLVNCSYLNELVLSDNHLSGSIPYEFGSLGRLKRFSVANNKLSGSIPEFFSGFDKEDFAGNSGLCGGPLSKCGGMSKKNLAIIIAAGVFGAAASLLLAFGLWWWYHLRLSGGGGGRRKGGYEVGGVDDWAVRLRGHKLAQVTLFQKPIVKVKLGDLMAATNNFSAENVLIATRTGTTYRADLSDGSTLAVKRLNTCKIGEKQFRMEMNRLGQVRHPNLAPLLGYCVVEEEKLLVYKHMSNGTLYSLLHKNNELDWPMRFRIGLGAARGLAWLHHGCHPPIIQQNVCSNVILVDEEFDARLMDFGLARLMTSDANGSFVNGDLGELGYIAPEYPSTLVASLKGDVYGFGVLLLELVTGCKPLEVSAADEEEFKGSLVDWVNMHSSSGRLKDCIDKAISGRGHDEEIVQFLKIASNCVLSRPKDRWSMYQVYHALKNLSKDHSFSEHDDEFPLIFGKPENEPA* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1665 605 SUPERFAMILY L domain-like 27 205 - -
Lja2g1665 605 Gene3D Ribonuclease Inhibitor 28 218 IPR032675 -
Lja2g1665 605 SUPERFAMILY Protein kinase-like (PK-like) 286 577 IPR011009 -
Lja2g1665 605 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 18 599 - -
Lja2g1665 605 ProSiteProfiles Protein kinase domain profile. 307 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1665 605 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Lja2g1665 605 Gene3D Transferase(Phosphotransferase) domain 1 382 599 - -
Lja2g1665 605 Pfam Protein tyrosine and serine/threonine kinase 325 522 IPR001245 GO:0004672|GO:0006468
Lja2g1665 605 Gene3D Phosphorylase Kinase; domain 1 269 381 - -
Lja2g1665 605 PANTHER RECEPTOR-LIKE PROTEIN 55 18 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1665 Lja-Chr2 16643314 16645859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1665 11 603 Receptor kinase-like Gene Family AT3G28450 63.228 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lja2g1665 PK_Tyr_Ser-Thr 8.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1665 - - gmx:100810378 952.584