Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1644 ATGGGGTATGGGGATAATAATGCAATTCAAGCTGGGAGTTTGGATGTGGACAAGTCAAAGGGAAGCAAGAAGAAGGTTGATGATGGTGCAAAGAAGGAGAGAGGATGGTGGTTTAGATTCAGTTTCTTTGGGAGCTGCATACCTTCAAGACCAAAAGTTGATAGCTCCATAAGTGGCACTAGTACCCATAATGGTAACAGTATCAAGTCAGTGATAACTCAATCAGAGGAAAACAAATCTGGATTTGAAAAAAATACAGAGGAAACAGAGGCTCCTCCAGAGTCCTCTACAACAACTAGTAATGAGGAAAGCATTGCTTCCACTCCAAAATTATTCAGTGAGGAGTTGAAGGTGGCTTCTAGTTTGAGGAAATTCACATTCAATGGGCTTAAGGTGGCAACTAGGAATTTCAGACCAGAGAGTCTTCTTGGTGAAGGAGGGTTTGGTTGTGTCTTCAAGGGTTGGATTGAGGAGAATGGAACTGCACCTGTGAAACCGGGGACCGGGCTTACAGTTGCAGTCAAGATCCTCAACCACAATGGACATCAGGGTCATAAAGAGTGGCTTGCTGAATTGAACTATCTTGGTGATCTTCTCCATCCTAATCTCGTTAAATTGATTGGTTTCTGTATCGAAGATGACCAGCGATTATTGGTTTACGAGTTTATGCCTCGAGGCAGTTTGGAGAACCACCTCTTTAGGAGGCCCCTGCCTCTTCCTTGGTCAATCAGAATGAAAATTGCACTCGGTGCTGCAAAAGGTCTTGCTTTTCTCCATGAAGATTCTCAGAGGCCCATAATATATCGTGATTTCAAAACATCTAATATTCTTTTAGACGCGGAATACAATGCCAAGCTTTCTGATTTTGGACTTGCCAAAGATGGTCCTGAGGGGGAAAAGACACATGTATCTACAAGAGTTATGGGAACATATGGTTATGCTGCTCCGGAGTATGTGATGACAGGACATCTGTCATCAAAAAGTGATGTCTACAGCTTCGGAGTAGTGCTACTTGAAATGCTCACTGGTCGGCGGTCTATTGATAAGAAAAGACCAAATGGGGAACACAATCTAGTGGAGTGGGCAAGGCCTGTACTCGGGCACAGGAGGATGTTCTTCCAGATAATAGATCCCCGCCTTGAAGGTCACTTCTCAGTTAAAGGGGCACAGAAAGCCGCCCAGCTGGCTGCGCAATGCCTTAGCCGCGATCCAAAAGCTAGGCCTTTGATGAGTGAAGTGGTTCACACTTTAAAGCCTTTGCCAAACCTCAAGGACATGGCCATCTCATCTTATCACTTTCAGACTGCGCGAGTAGATCGAACCATGTCCATGCCGAATCATAAAAACGGTATCAGAACACAGTTGGTATCTTTACCAAAGAAGGGTCAACCTTTAAGGATCTTATCAAGTCCAAATTGTCCAAATGGTTCTCCATATTCTCGTTATAGCAAGTCCCCAAAACCTGTTGGGTAA 1473 0.4426 MGYGDNNAIQAGSLDVDKSKGSKKKVDDGAKKERGWWFRFSFFGSCIPSRPKVDSSISGTSTHNGNSIKSVITQSEENKSGFEKNTEETEAPPESSTTTSNEESIASTPKLFSEELKVASSLRKFTFNGLKVATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKILNHNGHQGHKEWLAELNYLGDLLHPNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRMKIALGAAKGLAFLHEDSQRPIIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHVSTRVMGTYGYAAPEYVMTGHLSSKSDVYSFGVVLLEMLTGRRSIDKKRPNGEHNLVEWARPVLGHRRMFFQIIDPRLEGHFSVKGAQKAAQLAAQCLSRDPKARPLMSEVVHTLKPLPNLKDMAISSYHFQTARVDRTMSMPNHKNGIRTQLVSLPKKGQPLRILSSPNCPNGSPYSRYSKSPKPVG* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1644 490 CDD STKc_IRAK 143 420 - -
Lja2g1644 490 Gene3D Phosphorylase Kinase; domain 1 117 222 - -
Lja2g1644 490 Gene3D Transferase(Phosphotransferase) domain 1 223 439 - -
Lja2g1644 490 ProSitePatterns Protein kinases ATP-binding region signature. 143 175 IPR017441 GO:0005524
Lja2g1644 490 MobiDBLite consensus disorder prediction 17 31 - -
Lja2g1644 490 MobiDBLite consensus disorder prediction 468 482 - -
Lja2g1644 490 Pfam Protein kinase domain 140 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1644 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Lja2g1644 490 MobiDBLite consensus disorder prediction 51 79 - -
Lja2g1644 490 MobiDBLite consensus disorder prediction 467 490 - -
Lja2g1644 490 MobiDBLite consensus disorder prediction 1 31 - -
Lja2g1644 490 MobiDBLite consensus disorder prediction 47 106 - -
Lja2g1644 490 PANTHER RECEPTOR-LIKE KINASE PLANT 76 482 - -
Lja2g1644 490 ProSiteProfiles Protein kinase domain profile. 137 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1644 490 SUPERFAMILY Protein kinase-like (PK-like) 119 417 IPR011009 -
Lja2g1644 490 PANTHER OS01G0588500 PROTEIN-RELATED 76 482 - -
Lja2g1644 490 MobiDBLite consensus disorder prediction 91 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1644 Lja-Chr2 16361905 16366018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1644 77 433 Glycoside Hydrolase AT3G07070 50.000 3.11e-114 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lja2g1644 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1644 - - gmx:100499647 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1644 2 16361905 16366018 Lja1g2897 1 35016011 35021501 PCT