Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1629 ATGGCAAGCCCTACTAGTGCCAAGGTTGGGCCTCAAAATGTGGGAAAATCCAAGACAAGAAGAAACAACGAAGGTGTCCAAAGCAAAGGTCCAAGCTTTTTAACGAGGATGTTTGGGTGTTTCATAGATTTGAGGTCCAAACCTGATGGCGCCTTGAGTACTAACAACAAACAAGATGATTTTCTACCTCCTTCCATCACTTTTGTTACAGTTGCTCCCGGCTCTTCAAGCAAGAGCCCTTCTACACCTCACTTGAGCAAGGAATTGAAACATTATCCCCATCTTCGACAGTTCACCTTTCGTAACCTGAAGTTGGCAACTGGGGATTTCCAATCTCGTCTCGGTGAGGGAGGCTTTGGTCCTGTATACAAAGGCTGGATCAGTCACAAGGGGGCCTCCCCCACAAGTCCCGGAGTCGGTCTTCCGGTTGCAGTCAAGATTCTTAAAAAAAATGGATTGCAGGGCCATCGCGAATTTGTTACTGAAGTTAACCATCTTGGTGGTTTAGATCATCCACACCTTGTTAAGTTGATTGGTTATTGCACTGAAGGTGAAGAAAGGGTACTTGTTTATGAGTATATGACCAAAGGAAGCTTAGAGCATCATCTCTTCAGGAGACCATATGTTCCCCTTCAGTGGTCAGTGAGAATGAAAATCATGCTTGGTGCTGCTAAGGGCCTTGCATATCTCCATGAGGAAGCTGAGAAACCTTTGATATATAGAGACTTCAAATCTTCAAACATTCTATTGGACAAGGACTACAATGCCAAACTTTCTGATTTTGGGCTTGCAAGAGATGGTCCTGTGGGAGACTCTACTCATGTCTCAACTCGTGTATTGGGAACACAAGGCTATGCAGCCCCAGAGTATATCATGACAGGGCACCTTACTGCCAAGAGTGATGTGTACAGCTTTGGCGTGGTTCTGCTTGAGATGCTGACCGGGAGAAAATCCATGGACAAAAAAAGGGGTCGAGATGCGGTTAACTTGGTTGAGTGGGTGCGACCTAAACTCAGGAAAGGGGGATCAATGTTCCATGAACTGATGGATCCTCAGCTTGGAGGTCAGTACTCAAGAAGAGCTGCTAATAAGGTGATGAATTTGGCTTTGAATTGCGTTAGCTGGGACGCGAAAGACAGGCCCGTGATGAGTGAAGTGGTGAAAGTTCTCAGCTCTCTTCCTCATTGCAAAGAGAAGATGGCTTCTTCCTCTTCACCATCCCCACCATCACCCTTGAATGTTGGCTCCTCGGACAATGGTGATTTCATAAATGGCTCTTCAGCTAGGGGCACACCGAGTCGCTTCAAAGCCTCCCCGTGCAACCTTCCTCTTCCTTCACCCAAAGCTAGTGGTGGAAGGTCATGA 1365 0.4667 MASPTSAKVGPQNVGKSKTRRNNEGVQSKGPSFLTRMFGCFIDLRSKPDGALSTNNKQDDFLPPSITFVTVAPGSSSKSPSTPHLSKELKHYPHLRQFTFRNLKLATGDFQSRLGEGGFGPVYKGWISHKGASPTSPGVGLPVAVKILKKNGLQGHREFVTEVNHLGGLDHPHLVKLIGYCTEGEERVLVYEYMTKGSLEHHLFRRPYVPLQWSVRMKIMLGAAKGLAYLHEEAEKPLIYRDFKSSNILLDKDYNAKLSDFGLARDGPVGDSTHVSTRVLGTQGYAAPEYIMTGHLTAKSDVYSFGVVLLEMLTGRKSMDKKRGRDAVNLVEWVRPKLRKGGSMFHELMDPQLGGQYSRRAANKVMNLALNCVSWDAKDRPVMSEVVKVLSSLPHCKEKMASSSSPSPPSPLNVGSSDNGDFINGSSARGTPSRFKASPCNLPLPSPKASGGRS* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1629 454 MobiDBLite consensus disorder prediction 398 454 - -
Lja2g1629 454 MobiDBLite consensus disorder prediction 398 434 - -
Lja2g1629 454 MobiDBLite consensus disorder prediction 1 30 - -
Lja2g1629 454 Gene3D Phosphorylase Kinase; domain 1 82 193 - -
Lja2g1629 454 SUPERFAMILY Protein kinase-like (PK-like) 96 419 IPR011009 -
Lja2g1629 454 Pfam Protein tyrosine and serine/threonine kinase 110 390 IPR001245 GO:0004672|GO:0006468
Lja2g1629 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Lja2g1629 454 Gene3D Transferase(Phosphotransferase) domain 1 194 407 - -
Lja2g1629 454 CDD STKc_IRAK 114 393 - -
Lja2g1629 454 PANTHER TYROSINE KINASE FAMILY PROTEIN 67 421 - -
Lja2g1629 454 ProSiteProfiles Protein kinase domain profile. 108 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1629 454 PANTHER OS01G0588500 PROTEIN-RELATED 67 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1629 Lja-Chr2 16235783 16238753 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1629 86 393 Glycoside Hydrolase AT3G07070 51.923 1.09e-104 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lja2g1629 PK_Tyr_Ser-Thr 6.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1629 - - mnt:21409785 432.95