Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1584 ATGGATGGATCAAATGGCCATGGTAGTGGTGAAAGTGTGCACATGTTTCTATCAAATTATAAGCTGGGAAAAACACTTGGCATAGGGACCTTGGGCAAGGTGAGAATTGCAGAGCATGTATTAACTGGTGATAAAGTCGCCATAAAGATCCTTAACCGCCGCAATATAAATAACATGGAACTTGAAGAAAAAGCTTTGAGAGGAACCAATGTTATAAGATCCTTATCACATCCTCACATTATTCAAGTTTATAAGGTGGTAGAAACCCCAACAGAGGTATATGTTGTTATGGAGCATATGAAATCTGGAGACCTCTTTGATTACATAGTAGAAAGGGGTAGGTTGGAAGAAGATGAAGCTCGTAATTTTTTCCAGCAGATAATTTCTGGTGTGGAGCACTGTCACAAAAATAAGGTGGTTCACAGAGACCTGAAGCTTGAAAGTGTACTTCTAGACTCAGAATGCAATGTCAAAATTGCTCATTTTGGCTTGAGCACCATCATGCAAGATGGTATCCTTCTCAAGACAAGTTGTGGAACCCCTAACTATGCATCTCCTGAGCTCATCTCTGGGAAATTGTATGCTGGACCTGAAGTAGATGTATGGAGCTGTGGTGTAATGTTATATGCTATTCTCTGTGGCACTTATCCTTTTGATGATGAAAACATTCCCAACTTGTACAAAAAAATAAAGAGCGGGATATACACTCTTCCTAGTCATCTATCTCCTAGTGCTAGTGATCTAATATCAAGGATGCTTGAGGTGGATCCTGTGAAAAGAATAACCATACCTGAGATATGTCAACACCCATGGTTCTATGTTCATCTGAAGCAATATTTAGTAGTGCCACCACCAGACACAATGCAGAAAAATGACAAGGATAGGGACCTGGTTCTCAAAACAGGGCCTTGGTTTTTTGAACGCCACATGATGGCGCTGAATGTATTCGACGTCCTTGCCATTTATGGCTTTCCTGATTTGCAGAATAAATTTCGCACGTGGGAATTGGTTCGACGGTTCAAGCCTACAGGCTCAATTGTGGGATCCACTTGGTGGAATCTTCCGGTTACTCTTTCACTTGGTCTAATAAGAGGGCCCACCCGGCGACGGTGGAAGAACGAGGGTACTTTATCTCGTGCTGGGAGAGAAGTATTGATTAAGGCGGTGGCTCAAGCAATCCCCTCTTATGTAATGTCATGTTTTATTTTACCAGACGGCCTTTGTAAGGAGATTGAGGGGATGATTTCCAGGTTCTATTGGGGTGGTGATGCCTCCAAGCGGAGTCTTCATTGGCTAAGGTGGGATAAACTTTGTCAGCCCAAATTTGATGGGGTTTTGGTATGGTCGCGAGGAACAAAGATGGCCTCATCATGGCCGCAGCTTCTTTTTATCCAGTCGTGGCACTGTCAGCTACAATTGCAGAGGCTTTGTCATTGA 1437 0.4294 MDGSNGHGSGESVHMFLSNYKLGKTLGIGTLGKVRIAEHVLTGDKVAIKILNRRNINNMELEEKALRGTNVIRSLSHPHIIQVYKVVETPTEVYVVMEHMKSGDLFDYIVERGRLEEDEARNFFQQIISGVEHCHKNKVVHRDLKLESVLLDSECNVKIAHFGLSTIMQDGILLKTSCGTPNYASPELISGKLYAGPEVDVWSCGVMLYAILCGTYPFDDENIPNLYKKIKSGIYTLPSHLSPSASDLISRMLEVDPVKRITIPEICQHPWFYVHLKQYLVVPPPDTMQKNDKDRDLVLKTGPWFFERHMMALNVFDVLAIYGFPDLQNKFRTWELVRRFKPTGSIVGSTWWNLPVTLSLGLIRGPTRRRWKNEGTLSRAGREVLIKAVAQAIPSYVMSCFILPDGLCKEIEGMISRFYWGGDASKRSLHWLRWDKLCQPKFDGVLVWSRGTKMASSWPQLLFIQSWHCQLQLQRLCH* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1584 478 CDD STKc_AMPK_alpha 17 272 - -
Lja2g1584 478 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 10 311 - -
Lja2g1584 478 ProSiteProfiles Protein kinase domain profile. 20 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1584 478 SUPERFAMILY Protein kinase-like (PK-like) 16 302 IPR011009 -
Lja2g1584 478 Pfam Protein kinase domain 20 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1584 478 PANTHER SERINE/THREONINE KINASE 10 311 - -
Lja2g1584 478 Gene3D Transferase(Phosphotransferase) domain 1 11 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1584 Lja-Chr2 15545914 15554619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1584 11 339 CBL-interacting serine-threonine protein kinases AT2G26980 39.118 7.17e-82 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Lja2g1584 Pkinase 5.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1584 K07198 - zju:107415944 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1584 2 15545914 15554619 Lja2g1584 2 15545914 15554619 ECH