Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1580 ATGGAAATTGGTTCCAGAATTGTACTTTTGGTGAGTGTTGTTATGGTGGTCATAGCTGCAGGGTTGTGGCCAATGGCGGCTGTGGAAGGAGGTCCAGTGCTTCATAAAGTGGGAGCCTCCAAAGGTTGGCATCAGGATATCAACTACACTCAGTGGTCTGCTCAAGAGCATTTCTACGTTGGTGATTGGCTCTTGTTCAAGTTTGACAAGCGATACTACAACGTTCTGGAAGTGAACAAGACAAGCTACGAGAGCTGCATAGACTGGGCGTTCATCAGAAACATCACGCGCGGTGGTCGCGACGTGGTTCAGTTGACAGAGGCAAGGACATACTACTTCCTCTCTAGCGGAGGCTACTGCTTTCATGGAATGAGAGTTGCTGTGCAGGTTGAACAATACCAACAAGGTGCACCAGCAGGGGCACCATCTCCTTCTGAGATGAATCACTCTGGTTCTATTTTGCCTTCTGGGTTGTGCACCTACATTTGGATTGTTGTTGCTAATGTGCTTTATGTGAATTTGGTTTCATTGGGCATTTTGTAA 543 0.4715 MEIGSRIVLLVSVVMVVIAAGLWPMAAVEGGPVLHKVGASKGWHQDINYTQWSAQEHFYVGDWLLFKFDKRYYNVLEVNKTSYESCIDWAFIRNITRGGRDVVQLTEARTYYFLSSGGYCFHGMRVAVQVEQYQQGAPAGAPSPSEMNHSGSILPSGLCTYIWIVVANVLYVNLVSLGIL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1580 180 SUPERFAMILY Cupredoxins 34 130 IPR008972 -
Lja2g1580 180 PANTHER EARLY NODULIN-LIKE PROTEIN 20 14 140 - -
Lja2g1580 180 Gene3D - 33 133 IPR008972 -
Lja2g1580 180 ProSiteProfiles Phytocyanin domain profile. 33 132 IPR003245 GO:0009055
Lja2g1580 180 PANTHER BLUE COPPER PROTEIN 14 140 IPR039391 GO:0009055
Lja2g1580 180 Pfam Plastocyanin-like domain 44 124 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1580 Lja-Chr2 15473703 15475655 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1580 28 170 Phytocyanin Superfamily AT2G27035 40.972 2.49e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1580 - - gmx:100788336 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1580 2 15473703 15475655 Lja2g1580 2 15473703 15475655 ECH