Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1578 ATGGAGAGGGTGAAGAAGAAGATGCTGGGGTCACCAGCCATGGTGCTTCTCTTCCTTGGTTTTGCTGTGCTTCTCATGGTCCCAGAGGTCTCAGCTAAACGGTGGCTGGTCGGTGATGGCAAATTCTGGAACCCCAATGTTAACTACACTGTATGGGCCAGGGACAAGCATTTCTACATTGATGACTGGCTCTTTTTTGTGTATGATAGGAACCAGATGAATGTGCTAGAAGTGAACAAGACGAATTATGAAAATTGCATTGCTGAGCATCCAATCCACAATTGGACCACAGGAGCTGGAAGAGATGTGGTTCCTTTGAATGTGACCCGTCATTACTACTTTATCAGCGGCAATGGGTTCTGCTATGGCGGCATGAAGTTAGCCGTTCGTGTTGAAAAGCTACCACCTCCACCCAAAGCTGCCCCTGAAAAAGCTGGGGCACCAAGCCTTTCCTCTAGAGGGGCCATTCTTCTCATGCCTGTTGTTTTTGCCATTGGAGCAGCATGGGATGCATTCATTTATTCACGGTAA 531 0.4783 MERVKKKMLGSPAMVLLFLGFAVLLMVPEVSAKRWLVGDGKFWNPNVNYTVWARDKHFYIDDWLFFVYDRNQMNVLEVNKTNYENCIAEHPIHNWTTGAGRDVVPLNVTRHYYFISGNGFCYGGMKLAVRVEKLPPPPKAAPEKAGAPSLSSRGAILLMPVVFAIGAAWDAFIYSR* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1578 176 PANTHER LAMIN-LIKE PROTEIN 13 168 - -
Lja2g1578 176 Pfam Plastocyanin-like domain 43 125 IPR003245 GO:0009055
Lja2g1578 176 PANTHER BLUE COPPER PROTEIN 13 168 IPR039391 GO:0009055
Lja2g1578 176 ProSiteProfiles Phytocyanin domain profile. 33 133 IPR003245 GO:0009055
Lja2g1578 176 Gene3D - 31 134 IPR008972 -
Lja2g1578 176 SUPERFAMILY Cupredoxins 32 131 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1578 Lja-Chr2 15464576 15467398 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1578 13 170 Phytocyanin Superfamily AT5G15350 61.250 1.41e-68 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1578 - - mtr:MTR_6g013420 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1578 2 15464576 15467398 Lja2g1578 2 15464576 15467398 ECH