Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1543 ATGGCGCAAACACTGAAAGTTCACCAAGTTTGCACGGTGGCGCCGCCACAAGAAGCCGCTGCAACCTCTCTCCCCTTCACCTTCTTCGACACCCTATGGCTGAGACTCCCTCCGGTGGAGCGTCTTTTCTTCTACGACCACCCCAACTCCACCACCTCCTTCTTTGACTCTGTTCTTCCAACTCTCAAACACTCCCTTTCAATCACCCTCCAACACTTCCTCCCTCTCGCCGGCACCATCACATGGCCCCTTGATTCCCCCCACCCCATCATCACCTATCTCCCCGGCGACGCCGTCCCCCTCACCGTAGCTGAATCAGCCGCCGATTTCAACCAGTTAAGCTCCAACCTCTGTGAAGCTCAAAAACGCCACCCCCTCATACCTCCCCTGAAAACCTCTCATGAGAAAGCCTCTGTTATGTCACTCCAGCTCACTCTCTTCCCAGACGCTGGATTCTCCATTGGAATAACCACACACCATGCAGCCCTTGATGGGAAAACCTCAACTTCATTCATGAAAGCTTGGGCCTCTGTTTGCTCTAACCTCAAAGTCAAAGATCAAAACCCCTGTTATTCACTCCCTGAGAATCTAACACCTTTCTTTGACAGGTCAGTGATAACAGACCCTTCAGGAATCAACGAGGTTTATGCGAATAGTTGGTTGAATTTCGGTGGAGAAACCAACAACCGAAGCTTAAAGGTGTGGGAAACGCTTGGTGGTGCAATAGGGGAGGATACAGTGAAAGGCTTGTTTGAGGTCACCCCTTCACATATAAAAAAGCTGAAGCAATATGCAGAGTCCAAGATTGATAAGAACAAGGTTCGTTTGTCATCGTTTTCAGTTACTTGTGCTTATCTGATTTCATGTGTGGTGAAAGTAGAACAAGTGAAATCGAAGAGAGTAGCTTTTGTGTTCAGTGTGGATTGTAGAACCCGTTTGGAGCCTCCAATTAAGCCAACTTATTTTGGGAATTGCATTATGCCTCACTTGGCTGTGGCTGAAACAGGAGAGGTTTTGGGTGATGATGGGTTCATCAATGCTCTTGTGGTGATTTCTGATGAGTTGAGTGAATTGGAGAGTGGGGTGATGAATGGAGCAGAGGATTGGATTTCAAAGATACAATCTGTGGCGGGTGATAAGATGTTTTCCACTGCAGGGTCACCTCGGTTTGAGGTTTTTGGTGTTGATTTTGGATGGGGAAGGCCTAAGAAGGTGGATGTTACTTCTGTTGATAGAACTGGAGCATTTTCTCTTTCAGATAGTAGGGACATTCATGGAGGAATTGAGATTGGTTTGGCATTGAACAAGTCTCAAATGGAGGCTTTTGCTGAAGTTTTTGCCAAAGGACTTGAATCCTTGTAA 1362 0.4714 MAQTLKVHQVCTVAPPQEAAATSLPFTFFDTLWLRLPPVERLFFYDHPNSTTSFFDSVLPTLKHSLSITLQHFLPLAGTITWPLDSPHPIITYLPGDAVPLTVAESAADFNQLSSNLCEAQKRHPLIPPLKTSHEKASVMSLQLTLFPDAGFSIGITTHHAALDGKTSTSFMKAWASVCSNLKVKDQNPCYSLPENLTPFFDRSVITDPSGINEVYANSWLNFGGETNNRSLKVWETLGGAIGEDTVKGLFEVTPSHIKKLKQYAESKIDKNKVRLSSFSVTCAYLISCVVKVEQVKSKRVAFVFSVDCRTRLEPPIKPTYFGNCIMPHLAVAETGEVLGDDGFINALVVISDELSELESGVMNGAEDWISKIQSVAGDKMFSTAGSPRFEVFGVDFGWGRPKKVDVTSVDRTGAFSLSDSRDIHGGIEIGLALNKSQMEAFAEVFAKGLESL* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1543 453 Gene3D - 5 232 IPR023213 -
Lja2g1543 453 PANTHER - 3 453 - -
Lja2g1543 453 Pfam Transferase family 12 445 - -
Lja2g1543 453 Gene3D - 243 453 IPR023213 -
Lja2g1543 453 SUPERFAMILY CoA-dependent acyltransferases 273 452 - -
Lja2g1543 453 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 3 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1543 Lja-Chr2 15117551 15119100 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1543 42 444 Monolignol Biosynthesis Gene Families AT5G48930 24.402 3.12e-22 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1543 - K13264 gmx:100127426 593.578