Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1542 ATGGCGCAACAAATGAAACTTCACCAAGTTTGTTCGGTGGCGCCGCCGCCACAAGAAACCAGTACTCCATCCTCTCTTCCCCTCACATTCTTCGACATTCCATGGCTAAGAATCCCTCCCGTGGTGCGTCTTTTCTTCTACGAGTACCCCAACTCAACATCTTCCTTCTTTGACTCTGTTCTTCCAAAACTCAAACACTCCCTTTCACTCACTCTCCAACACTTCCTCCCTCTCGCTGGTAACATCATCTGGCCGCATGATTCCTCCAAACCAATCATAAACTATGTCCCTGGTGATGCTGTTTCCTTCATTGTAGCTGAATCCAATGCTGATTTCAACCATGTATCCTCCAACTTCTGTGAAGGTGAACAACGCCACCCCCTCATATCTCGCCTCAACACGTCCCATGAAAAAGCCTCTGTTATGGCATTCCAAGTCACTCTCTTCCCAAACTCTGGATTTTCCATTGGGATAACCACACACCATGCAGTCCTTGATGGCAAATCCTCCATGCTGTTCATCAAAGCATGGGCCTATGCTTGCTCTAACCTCAAAGATCAGCAGCACTCTTCATCAGTTTCACTCCCTGAGAATCTAACACCTTTCTTTGATAGGTCAGTGATCAAAGACCCTTCAGGGATGGGCGAGGTTTACGTGAAGGGGTTGTTGAATCACGGTGGAGAAACCAACAATCGAAGCTTAAAGTTCACCCCTTCACATATCCAAAAGCTTAAGCAACATGCAGAGTTCAAGACTGAAAATAACAAGGTTCACTTGTCATCATTTTCGGTAGTGTGTGCTCATTTGCTGGCATGTGCAGTCAAGGCAGAACAACCTAAATCTAATAGAGTAGCTTGTGTGATTGGAATAGATTGTAGACACCGTTTAGAGCCTCCAATTAAGCCAACATATGTTGGTAACTGCATTGTTCCTCACATCGTTGAGGCTGAGACAGGGGAAGTGTTGGGTGATGATGGGTTCATCAATGCTCTTTTGAGGATAAGTGATGCGTTGAGTAGTTTAGAGGGTGGGGTTGTGAATGTAGCAGAGAACTGGATCTCAAAGTTTCAATCTGCGATGCGTTATAAGCTGTTTTCCATTACAGGATCACCTCGGTTTGATGTTTATGGTGTTGACTTTGGATGGGGGAGGCCTAAGAAGGTAGATATGCCTTCTGCCGACAGAGCTGGATCATTCTCTCTCTCGGCAAGTAGGGATCATGATGGAGGGGTTGAGATTGGTTTCGCCTTGAACAAGACTCAAATGGAGGCTTTTGCTCAAGGACTGAAATCCTTGGATTGA 1302 0.4578 MAQQMKLHQVCSVAPPPQETSTPSSLPLTFFDIPWLRIPPVVRLFFYEYPNSTSSFFDSVLPKLKHSLSLTLQHFLPLAGNIIWPHDSSKPIINYVPGDAVSFIVAESNADFNHVSSNFCEGEQRHPLISRLNTSHEKASVMAFQVTLFPNSGFSIGITTHHAVLDGKSSMLFIKAWAYACSNLKDQQHSSSVSLPENLTPFFDRSVIKDPSGMGEVYVKGLLNHGGETNNRSLKFTPSHIQKLKQHAEFKTENNKVHLSSFSVVCAHLLACAVKAEQPKSNRVACVIGIDCRHRLEPPIKPTYVGNCIVPHIVEAETGEVLGDDGFINALLRISDALSSLEGGVVNVAENWISKFQSAMRYKLFSITGSPRFDVYGVDFGWGRPKKVDMPSADRAGSFSLSASRDHDGGVEIGFALNKTQMEAFAQGLKSLD* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1542 433 Gene3D - 5 230 IPR023213 -
Lja2g1542 433 Gene3D - 231 431 IPR023213 -
Lja2g1542 433 PANTHER - 3 431 - -
Lja2g1542 433 SUPERFAMILY CoA-dependent acyltransferases 256 403 - -
Lja2g1542 433 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 3 431 - -
Lja2g1542 433 Pfam Transferase family 17 427 - -
Lja2g1542 433 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1542 Lja-Chr2 15101796 15103414 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1542 33 429 Monolignol Biosynthesis Gene Families AT5G48930 26.128 4.06e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1542 - - gmx:100785084 500.36