Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1539 ATGTCCAAAAAGGTTTTGACACCCATGAAGGATGAAAGTCCAGATTTTCAGAAGCAGATTGGGTGCATCAGTGGATTTTTTCAACTGTTTGACCGCCACCGGTTCATCACAGGGCAACGCAGTAGCAGCCAGAGTCATAGCATTCCAACACAAGGTGGAACCAGGAAGCACATCAAAGAACTGAATAATACAGCACAAAAGTCAACGGCAAAGAATGTGAAGGCTGCAAAAGAGAATCAACCATTCTCCACAGAATCATCAGGGACTTCAATGTCTTCATCATCTTGTTCATCTAGCATGTCATCAATGGACTTTAGCAGAACAATTCAGATGGAACCGCCATCAACCAGTCAAATCAAAATCCCAGAAAACTTCAATTCAGGAGCACAAAGGAAGCAGCAACCTAGCCCCCGAAGACCTCAGTCGCTTGATTGCTATGACATTGTCAAAGACTCAATGCATAAAGATGCGCAAGGATTGTCAGTAAAAACTGTAGCTAAAGGGGAAAAGAAGGGTCGAATCTTGAGACACATTGACTCTCCCCGGCCTTTGCAGGCTCCAATATCTGTCAAAACAGGAGCTATGGTTGCTTGGGATTCACCACGACTCTCATACGATGGGAGGGATGTACAAGATACATTCAAATCTGCTACAAAGCACAAGGAACTCCCTAGGCTTTCCCTGGACAGCAGAAAAGGATCCATCAAAAGTTTCAATGAAGGAACAAAATCTCGCAACTTTCTGAAGGCTCCAGAGAAAGAGTATGGGGGCGCCAGCGCAATGCATAAGCAGCTACAAGAACCAGAAACTTCTAAAAGACCATCTAGTGTTGTAGCAAAGTTAATGGGACTGGAATCTTTCCCAGACTGTGCCCAAACTTGTGATACTCCACGGGGGATCTCTAGTTGCACTACCAACAAAGTTGAGATGTCTGCAGGATCTAGCACGAATGATGAATTCAAGCAGCCCCAAAGTTCAGCATCCCCAAGGACAAGCAAGGGGTCTAACTTGCTTCCGTCTACTAGGGATGCTTCAATCATGATTGTGAAACCATATGCACAATTTTCTCAGGAAGCAACTCCATTGAGACAAGCTGATGCAAGCCAAGGTTCACAGTTGCAGATTTCCAAGAGAAATGACTGTTCAACAAAAGCAACAAACGCATCCCTCTCTGTATACGGGCAAATTGAGAAAAGGGTGGCAGATCTAGAGTTCAAAAAATCTGGAAAGGATCTCAGAGCCCTTAAACAGATTCTTGAAGCGATGCAGAGATATAAAGAATCAATAGATATAACGAGTGATCAGGCTTCGAATTCTCCATCTGACAATAGGAATGATAGTAATCTCAGAGTAAGTTTGAAAGTGCAAAGCCCAAGAATACAACAGAAGGACTCAACATCGGCCACTGTTGAGATTTCAAATTCAACCCAGGGTAGTAAATCGCCAATTGTCATCGTGAAACCAGCAAAAGTTGCAAGAAAAACCAATGATTCTGCTTTCACAGAAATGAGAAGTCATGGTAAATCAGGTCTCAGTAAGTTTGGTCCTGGTAATCCCAGAAATAGAATATTGGTTGACAAGCTTGACATGCAAACAACAAAAGATAGTCCAGCAATGAGACATGTCAATCATCCTACTAGTCAACCTTTTCATGCCGCAGATAAGAGTAACAAGATGAGGACATCAAGACTGATGCAATCATCAAAAGTTCCTCGAGTCATTAATGGAGAAAGCAACACTACCTCCACCAGTATATCAGAGAACAGGAGCCCAAGAGTACAGAAGAAAATTGGTTTGGAGAGGCGTTCTCCAGCAACCAGCCCATCATCAGATTCCAGCAGTAACAGAAGACAACACAATAGGCATTCAACGGAATTGTCTTCCGCTAGTGTTATACCCAGACAAAAATTCTCTACTTTGCAGGAAAGAAATGAACTTCTCAGCGAGATCACCTATCAAAGGATGGGTTTTAAGCATGGAGTCGATGTTATTTTGCCAGATTTTGGCAGCAAGAGAAGCATGGGTTCTCACAGTGATATAGAAGACATTCACAATGATCACCCTGAAAAGATCAATAGTAACTCCATCCAGCAAAAAGGCTTAAGTCAAAATAATGCAGAAAACGAGCTGAGCCAGGAAAACTTGATAGCTGAAAAAATAGTAACTGCAGAACAACCTAGTCCAGTGTCTGTTCTTGATGCTGCATTCTATAAAGAAGACCCCCCTTCTCCAATCAAAAGGAAATTGGAAATCTCAAAAGATTTAGATGAAGCTCTGAACACTTATGATATTGATGAGGAGAACTCAGAAGATTTTCCTCTTTCATCCAACACCACAAAAGCCAACTTCAGCAATGGAACCAGGGACATTGACTTTAAAACTCATAATTTGGTTCAAGTTATTCAACAAATTGACTACAGTGATGAGAGATTCACCAATTTCAGTGACAGTAAAGATCCTGAACACAAATATGTATCAGAAATACTGTTAGCATCAGGGCTTCTCACTAGTCCCAGCTCTAGCCAGGCATTTTATTCATCAGGTTACCCAATAAACCCAACAGTGTTCCTTGCACTAGAGCAAATCCAGACAGGCAAGAAACATTTCAATGTTGAACACGGTGCCAAGAAGATTGTTAAGATGAATAATCCACGGCAAATGCAAAGGAAGCTCATATTTGATGTCATTAATGAGATTCTAGTTCAAAAGCTAATATTGGAGAGTTCCACTCTGTGGTGCCAGCCAAACCAACCAGCAGGAAGAAAACTAAAAGGAAAGCAACTTTTGGATGATCTTTGCACCAAAATTGACAAGTTACAACATAAAAATAGGAATCTCAACCTGGCTCATGAGGATGAGAAATTGACAAGTCTTCTGTGGGAAGATTTAACACAACAGCCCACAACTTGTGCAGAATGCTTCAGTGAGATACCAAATGTCGTGTTGGATATCGAGAGGTTGATCTTCAAAGATTTAATTACAGAAGCTGTGAGAGGTTAA 3000 0.416 MSKKVLTPMKDESPDFQKQIGCISGFFQLFDRHRFITGQRSSSQSHSIPTQGGTRKHIKELNNTAQKSTAKNVKAAKENQPFSTESSGTSMSSSSCSSSMSSMDFSRTIQMEPPSTSQIKIPENFNSGAQRKQQPSPRRPQSLDCYDIVKDSMHKDAQGLSVKTVAKGEKKGRILRHIDSPRPLQAPISVKTGAMVAWDSPRLSYDGRDVQDTFKSATKHKELPRLSLDSRKGSIKSFNEGTKSRNFLKAPEKEYGGASAMHKQLQEPETSKRPSSVVAKLMGLESFPDCAQTCDTPRGISSCTTNKVEMSAGSSTNDEFKQPQSSASPRTSKGSNLLPSTRDASIMIVKPYAQFSQEATPLRQADASQGSQLQISKRNDCSTKATNASLSVYGQIEKRVADLEFKKSGKDLRALKQILEAMQRYKESIDITSDQASNSPSDNRNDSNLRVSLKVQSPRIQQKDSTSATVEISNSTQGSKSPIVIVKPAKVARKTNDSAFTEMRSHGKSGLSKFGPGNPRNRILVDKLDMQTTKDSPAMRHVNHPTSQPFHAADKSNKMRTSRLMQSSKVPRVINGESNTTSTSISENRSPRVQKKIGLERRSPATSPSSDSSSNRRQHNRHSTELSSASVIPRQKFSTLQERNELLSEITYQRMGFKHGVDVILPDFGSKRSMGSHSDIEDIHNDHPEKINSNSIQQKGLSQNNAENELSQENLIAEKIVTAEQPSPVSVLDAAFYKEDPPSPIKRKLEISKDLDEALNTYDIDEENSEDFPLSSNTTKANFSNGTRDIDFKTHNLVQVIQQIDYSDERFTNFSDSKDPEHKYVSEILLASGLLTSPSSSQAFYSSGYPINPTVFLALEQIQTGKKHFNVEHGAKKIVKMNNPRQMQRKLIFDVINEILVQKLILESSTLWCQPNQPAGRKLKGKQLLDDLCTKIDKLQHKNRNLNLAHEDEKLTSLLWEDLTQQPTTCAECFSEIPNVVLDIERLIFKDLITEAVRG* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1539 999 MobiDBLite consensus disorder prediction 360 380 - -
Lja2g1539 999 MobiDBLite consensus disorder prediction 456 478 - -
Lja2g1539 999 MobiDBLite consensus disorder prediction 501 521 - -
Lja2g1539 999 MobiDBLite consensus disorder prediction 534 636 - -
Lja2g1539 999 PANTHER LONGIFOLIA PROTEIN 1 998 IPR033334 GO:0051513
Lja2g1539 999 Coils Coil 929 956 - -
Lja2g1539 999 MobiDBLite consensus disorder prediction 309 339 - -
Lja2g1539 999 MobiDBLite consensus disorder prediction 64 105 - -
Lja2g1539 999 MobiDBLite consensus disorder prediction 536 591 - -
Lja2g1539 999 Coils Coil 58 78 - -
Lja2g1539 999 Pfam Domain of unknown function (DUF4378) 821 995 IPR025486 -
Lja2g1539 999 PANTHER LONGIFOLIA PROTEIN 1 998 - -
Lja2g1539 999 MobiDBLite consensus disorder prediction 255 275 - -
Lja2g1539 999 MobiDBLite consensus disorder prediction 38 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1539 Lja-Chr2 15072203 15077160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1539 143 997 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 31.913 3.38e-79 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1539 - - aprc:113867263 1272.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1539 2 15072203 15077160 Lja2g1539 2 15072203 15077160 ECH