Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1533 ATGAGGCTAACACTGATCCTCCTCTACTTTTCACTCTCAATTGTTATACTCTCCACCTATCTCCAAGCTTATGATCCAGTTGATCGTTTCACCATCAATTGCGGCTCCAGCGGCAACTCCTCCGACGGTGGCGAAAGGACATGGATGGGGGACACAGACTCAAAGCTATTATCTCCTGAACAAATCTACACAACAGTCACAGCTCCAGCAAACACACAAGCCCCTTCCATCAAGCAAATCCCCTACTCCACAGCTCGATTATCCCGCTCCCAATTCAATTACTCCTTCCCAGTCACCGCAGGCCCCAAATTCCTCCGCCTCTTCTTCTACCCAGCTTCATACTCAGGCGGCTTCAACCGCGGAGACGCTTCCTTCACCATCATATCCAACGGATTCACCCTCCTGAAGGACTTCAACGCTTCACTCACCGCGGATGCTGAAGGACTTGACCCCATCTTCAGAGAATACACCATCAACGTCAACAACGGCCAAAGGCTTGACTTGTCCCTCACTCCAACCACAAGCTCCTCCTATGCTTTCATCAATGGAATTGAGATTCTATCCATGCCTAGTGACCTCTACTACACACCCTCCACTGACCCAGGATTCAAGCTCCTGGGTAGCAGCAACCTCTACAGCGCTGTAACCAGCACTGCACTGGAGACAAGTTACAGAATCAAAGTTGGAGGCCAAACAATCTCACCCAACAAAGACACAGGCTTATTCAGAAAATGGGAAGGCAACGATGAAGATTTCTTAAAAACACCGACCGCAATCGATTCTGTACCAGCTGACTTAAAGGATGCCAACATCACCGTGAGCCCTGATTACACAGCACCCAAGGACCTATACAGAACAGCACGCGACATGGGGTTGAACAAAACTCATAACAAAAGGATGAACCTGACTTGGGAGTTTCCTGTTGATGCTGGCTTCACCTACATGCTCAGGCTCCATTTCTGCGAGCTTGATCCTGCAATCACCGACACCAGCGACAGGGTTTTCTTCATCTACGTGACGGGTAGGGTTGCAGAGGATCGCGCTGATGTTATGAAATGGGCCAGCAATCAAAGAGGGGTTGCTGTTCATAGAAACTATGCTGTGATTGTTCCAAAGAATGATGTTAATCAGAAAAAGGTGAATCTCTCGCTCCAGATGCATCCTTATGCAGATAACGCAGATACAAAATTCAGCGATCCCTTCTTGAACGGGCTAGAAATTTTCAAGATCAGCGATGTAGCCACCAGCAACCTCGCCGGACCTAACCCGGATCCGCTTCAGACTCGGCCTAGCTCGCAAGCTCCGAGCGCGGGAAAGAAAAGTAAAAGCTCAACGACGCTGATCGGCGTCATCGCCGGGGTGGCTTCCGGCGTCGTTTTGTTGCTGGTTGTCATTTGCTCCGTCGTCATCCTCCGCCGGAGAAAAACGGGAACGGAAACGGAAGCAACAGCAAAAGCCTACACGGATCCGAAGTCGTCGAAGTGGGGCCCGCTGTCAATCTCGACGACGAAGTCGTCCAATACAAACTCATCCCTACCGTCGGATATCTGCCGGCAGTTCACAGTGGCGGAGATCCGCTCCGCGACGGGGAACTTCGACGAGAACTTCATCGTCGGGGTTGGCGGATTCGGCCACGTCTACAAAGGCTACATCGACGGCGGATTAACTCCGGTAGCCATCAAGCGTCTCAAACCAGGCTCCCAGCAAGGCGAACACGAGTTCATCAACGAGATCGACATGCTCTCGAAGCTCCGCCACCTCCACCTCGTCTCCCTCATCGGGTACTGCAACGAGAGCAACGAGATGATCCTCGTCTACGATTTCATGGCGCGTGGGACCCTCCGCGACCACCTCTACAACACGGAGAATCCTTCTTTATCATGGAAGCAGCGGTTGCAGATCTGCATCGGGGCGGCGCGTGGGCTTCACTACCTCCACACCGGCGCGAAACACACGATCATCCACCGTGACGTGAAAACCACGAATATTCTGTTAGATGAGAAGTGGATGGCGAAGGTTTCTGATTTCGGGTTATCGAGAATCGGGCCCACTGGGAATGTAAAAACCCACGTCAGCACGGTGGTGAAGGGTAGTGTTGGGTATTTGGATCCGGAGTATTATAAACGACAGCGTTTGACGGAGAAGTCTGACGTGTATTCTTTTGGTGTGGTGTTGTTTGAGATACTGTGTGCGCGTCCGCCTCTGATTCGGACCACCGAGAAGAAACAGGTGTCGCTTCCTGATTGGGCGAGGTTTTGTTATAATAATGGAACGTTGGGTGAGATTGTGGACCCCGCGTTGAGGGGGAGGATTGCGCCGGAGTGTTTGAGGAAGTTTGGGGAGATTGGGGTGAGTTGTTTGTTGGATGATGGGACCCACAGGCCGTCGATGAATGATGTTGTTTGGATGCTGGAGTTTGCGTTGCAGTTGCAGGAGAGTGCGGAGCTGCGTGAGGGTGGTGGTGGTGGTGAGGTGGTGGTGGGTGGGAAGAGGGATGATAGTGGTGGTGATGATATGTTTAGTAGTGGGACCAGTGTGGGCCAGGTTTCGGATTTTAATAAGGATAGTAGTGGGGTGAGTGTGAGTACTGCTAGTAGTGGAACTGATACTCATACTAGTAGGTTGATGACTTCAGGGACCGTTTTCTCTGAAATTATGGACCCAACCGCACGTTGA 2676 0.5149 MRLTLILLYFSLSIVILSTYLQAYDPVDRFTINCGSSGNSSDGGERTWMGDTDSKLLSPEQIYTTVTAPANTQAPSIKQIPYSTARLSRSQFNYSFPVTAGPKFLRLFFYPASYSGGFNRGDASFTIISNGFTLLKDFNASLTADAEGLDPIFREYTINVNNGQRLDLSLTPTTSSSYAFINGIEILSMPSDLYYTPSTDPGFKLLGSSNLYSAVTSTALETSYRIKVGGQTISPNKDTGLFRKWEGNDEDFLKTPTAIDSVPADLKDANITVSPDYTAPKDLYRTARDMGLNKTHNKRMNLTWEFPVDAGFTYMLRLHFCELDPAITDTSDRVFFIYVTGRVAEDRADVMKWASNQRGVAVHRNYAVIVPKNDVNQKKVNLSLQMHPYADNADTKFSDPFLNGLEIFKISDVATSNLAGPNPDPLQTRPSSQAPSAGKKSKSSTTLIGVIAGVASGVVLLLVVICSVVILRRRKTGTETEATAKAYTDPKSSKWGPLSISTTKSSNTNSSLPSDICRQFTVAEIRSATGNFDENFIVGVGGFGHVYKGYIDGGLTPVAIKRLKPGSQQGEHEFINEIDMLSKLRHLHLVSLIGYCNESNEMILVYDFMARGTLRDHLYNTENPSLSWKQRLQICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWMAKVSDFGLSRIGPTGNVKTHVSTVVKGSVGYLDPEYYKRQRLTEKSDVYSFGVVLFEILCARPPLIRTTEKKQVSLPDWARFCYNNGTLGEIVDPALRGRIAPECLRKFGEIGVSCLLDDGTHRPSMNDVVWMLEFALQLQESAELREGGGGGEVVVGGKRDDSGGDDMFSSGTSVGQVSDFNKDSSGVSVSTASSGTDTHTSRLMTSGTVFSEIMDPTAR* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1533 891 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Lja2g1533 891 Pfam Malectin-like domain 32 410 IPR024788 -
Lja2g1533 891 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 16 848 - -
Lja2g1533 891 MobiDBLite consensus disorder prediction 419 441 - -
Lja2g1533 891 PANTHER OS07G0166700 PROTEIN 16 848 IPR045272 GO:0004714|GO:0006468
Lja2g1533 891 Gene3D Transferase(Phosphotransferase) domain 1 609 819 - -
Lja2g1533 891 Gene3D Phosphorylase Kinase; domain 1 496 608 - -
Lja2g1533 891 SMART serkin_6 532 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1533 891 ProSitePatterns Protein kinases ATP-binding region signature. 538 561 IPR017441 GO:0005524
Lja2g1533 891 MobiDBLite consensus disorder prediction 818 891 - -
Lja2g1533 891 Gene3D - 218 411 - -
Lja2g1533 891 Gene3D - 29 190 - -
Lja2g1533 891 MobiDBLite consensus disorder prediction 494 511 - -
Lja2g1533 891 ProSiteProfiles Protein kinase domain profile. 532 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1533 891 SUPERFAMILY Protein kinase-like (PK-like) 506 807 IPR011009 -
Lja2g1533 891 MobiDBLite consensus disorder prediction 479 511 - -
Lja2g1533 891 CDD STKc_IRAK 538 805 - -
Lja2g1533 891 Pfam Protein tyrosine and serine/threonine kinase 538 801 IPR001245 GO:0004672|GO:0006468
Lja2g1533 891 MobiDBLite consensus disorder prediction 838 884 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1533 Lja-Chr2 15025871 15028546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1533 24 891 Receptor kinase-like Gene Family AT3G51550 50.168 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lja2g1533 Malectin_like 5.8e-40 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1533 - - gsj:114381619 1127.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1533 2 15025871 15028546 Lja2g1533 2 15025871 15028546 ECH