Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1527 ATGGCGCAACCAGCACCTTCGAGAGTTGTTGAAGCTTGCAGTGTGGAACCACTGCAGGGAGCAACTCCAACCTCTCTGCCACTCACCTTCTTTGACCTTTTGTGGCTACGCTTTCCACCCGTTGAGCGTCTCTTCTTCTATTCCTTCCCACACTCAACCTCTTCCTTCTTTGACTCTGTTCTTCCCACTCTCAAACACTCCCTTTCACTCACCCTCCAACACTTCCTCCCTCTTGCTGGTAACATCATCTGGCCCCATGATTCCCCCAAACCAATCATAAACTATGTCCCTGGTGATACTGTTTCCTTCACTGTAGCTGAATCCAATGTTGATTTCAACTACCTCTGTTCTGATCTCTATGAAGCTGAAAAAAGATATCACCTCATACCCCACTTGACCACTTCCCATGAAAAAGCCTCTCTGATTGCCCTGCAAGTTACTCTGTTTCCAAACTCTGGCTTTTGCATAGGACTAACCTCACACCATGCAGGTTTGGATGGAAAGTCATCAACATCATTCATGAAATCATGGGCCTTTTCATGCTCTAAACTACAAAAAGAAGGACTATCATCTCTGTTTCCATTACCTGAAGATCTAACACCTTTCTTTGATAGATCAGTGATAAAAGACCCAACAGGAATCACTGAAGTGTACATCAACGCATGGTTGAAGTTAGATGGACCAAATAATCGAAGCGTCAAGGTGTTTGAGTCCATGACAACAACACAGACCGATGCGGTTAAAGGCGTGTTTGAATTGACTCCCTCACATATCCAGAAGCTTAAGAAATATGCAGAGTCCAAGATTGAAAAGAAGGATCAGTTATCAACTTTTGCTGTAACGTATGCTTATGTGTTGGCAAGCGCGGTCAAAGCAGAACAGCCAAAGGGAGATTCAGATACTGTAATTTCTGCATTTACTGTGGATTGTAGATCCCGCTTGGACTCTCCGATTGCGCCCACTTATTTTGGAAATTGCATTGGTGGCCAAGTGTTTAAGGTTGAGATCAAGAGCTTGCTAGAGAAAGATGGATTCATTAGTGCTTTGGAGGAGATGAATGAAGCTTTGAAGAGGGTCAAGGATGGAGTGTTGAGTGGAGCAAAAGATTGGATTTCAAGTATACAGAAGATCCCAGAAGGAAGGGCATACTCTATTGCTGGATCGCCGCGGTTTGAGATTTATAGTATTGATTTTGGATGGGGAAGGCCAAAGAAGGTGGATATTACTTCCATAGACAGAACAGGAGCATTTTCTCTTTCGGAAAGTAGGAATAACAATAGAGGGATTGAGATTGGATTGGTGTTAAAAAAACATGAGATGGAAGCTTTTTCTGCCAGTTTTGTCCAACAACTTGAATCCTTTTAA 1365 0.4315 MAQPAPSRVVEACSVEPLQGATPTSLPLTFFDLLWLRFPPVERLFFYSFPHSTSSFFDSVLPTLKHSLSLTLQHFLPLAGNIIWPHDSPKPIINYVPGDTVSFTVAESNVDFNYLCSDLYEAEKRYHLIPHLTTSHEKASLIALQVTLFPNSGFCIGLTSHHAGLDGKSSTSFMKSWAFSCSKLQKEGLSSLFPLPEDLTPFFDRSVIKDPTGITEVYINAWLKLDGPNNRSVKVFESMTTTQTDAVKGVFELTPSHIQKLKKYAESKIEKKDQLSTFAVTYAYVLASAVKAEQPKGDSDTVISAFTVDCRSRLDSPIAPTYFGNCIGGQVFKVEIKSLLEKDGFISALEEMNEALKRVKDGVLSGAKDWISSIQKIPEGRAYSIAGSPRFEIYSIDFGWGRPKKVDITSIDRTGAFSLSESRNNNRGIEIGLVLKKHEMEAFSASFVQQLESF* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1527 454 PANTHER - 3 453 - -
Lja2g1527 454 Pfam Transferase family 15 446 - -
Lja2g1527 454 SUPERFAMILY CoA-dependent acyltransferases 251 452 - -
Lja2g1527 454 Gene3D - 243 454 IPR023213 -
Lja2g1527 454 Gene3D - 7 234 IPR023213 -
Lja2g1527 454 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 3 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1527 Lja-Chr2 14968611 14970880 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1527 9 443 Monolignol Biosynthesis Gene Families AT5G48930 26.509 1.05e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1527 - - lja:Lj4g3v0412780.1 661.759