Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1517 ATGGCTGTCTTCATGGCAATTCTTGGTGTTGTTGTCTTAGTGCTCTGTTTTTGCTCTGCCCTCTTGAGGTGGAATGAAGTGAGATACAGGAAGAAAGGTTTACCTCCTGGCACAATGGGGTGGCCAGTTTTTGGAGAAACAACTGAGTTTCTTAAACTAGGTCCAAACTTCATGAAAAACCAAAGAGCAAGGTATGGCAGTTTTTTCAAATCCCACATACTGGGTTGTCCTACCATTGTATCCATGGATCCAGAGCTTAATAGATACATTCTAATGAATGAAGCAAAGGGCCTTGTTCCAGGGTACCCACAATCCATGCTAGATATCTTAGGCAAGTGTAACATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGAGCACTTCTTTCCATCATTAGCCCCACCTTGATCAGAGATCAGCTTTTACCAAAAATTGATGAGTTCATGAGTGCCCACCTGAGTGATTGGGATAACAAAGTCATCAACATTCAAGAGAAAACTAAAGAGATGGCCTTCCTCTCATCTCTGAAGCAGATTGCTGGTCTGGAATCCAGCTCAATATCTGACTCATTCATGCCAGAATTCTTTAAGCTAGTTTTAGGAACCCTTTCTCTTCCTATTGACCTTCCTGGGACAAATTACCGCCATGGATTACAGGCTAGAAAGAGCATAATCAGCATTCTGAGTCAGCTATTAGAGGAAAGGAGAGCATCCAATGAAAGCCACCAAGACATGCTTAGTTGCTTGATGGGAAGAGATGAAAGTAAACACAAACTAAGTGATGAAGAAATCATTGATTTAGTCATCACAATCATGTATTCTGGTTATGAAACTGTTTCAACTACATCAATGATGGCAGTGAAGTACCTCCATGACCATCCCAAAGTTCTTGAAGAACTCAGAAAAGAGCACTTGGCCATAAGAGATAGGAAAAAGCCAGGTGATGCACTTGACTACAATGATATCAAGTCAATGAGGTTTACTCGTGCGGTCATTTTTGAGACATCTAGATTGGCAACAATAGTTAATGGGGTTCTAAGAAAAACCACTCAAGACATGGAACTAAATGGCTATTTGATTCCTAAAGGGTGGAGAATATATGTTTACACAAGAGAGATAAATTATGACCCATTTCTCTATCCAGATCCAATGGCATTCAACCCATGGAGATGGATGGATAAGAGCCTAGAGTCACAGAACTACTTCTTGATATTTGGAGGAGGGACAAGACAGTGTCCTGGAAAAGAGTTGGGAATAACAGAAATCTCAACTTTTTTACACTACTTTGTAACTAGATACAGGTGGGAAGAAGTTGGAGGAGATAAACTAATGAAGTTTCCTAGAGTTCAGGCACCAAATGGATTGCACATAAGAGTGACATCTTACTAA 1395 0.4072 MAVFMAILGVVVLVLCFCSALLRWNEVRYRKKGLPPGTMGWPVFGETTEFLKLGPNFMKNQRARYGSFFKSHILGCPTIVSMDPELNRYILMNEAKGLVPGYPQSMLDILGKCNIAAVHGSTHKYMRGALLSIISPTLIRDQLLPKIDEFMSAHLSDWDNKVINIQEKTKEMAFLSSLKQIAGLESSSISDSFMPEFFKLVLGTLSLPIDLPGTNYRHGLQARKSIISILSQLLEERRASNESHQDMLSCLMGRDESKHKLSDEEIIDLVITIMYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIRDRKKPGDALDYNDIKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYLIPKGWRIYVYTREINYDPFLYPDPMAFNPWRWMDKSLESQNYFLIFGGGTRQCPGKELGITEISTFLHYFVTRYRWEEVGGDKLMKFPRVQAPNGLHIRVTSY* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1517 464 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1517 464 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1517 464 PRINTS E-class P450 group I signature 285 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1517 464 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1517 464 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1517 464 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1517 464 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1517 464 Gene3D Cytochrome P450 25 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1517 464 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1517 464 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1517 464 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1517 464 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1517 464 Pfam Cytochrome P450 35 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1517 464 SUPERFAMILY Cytochrome P450 28 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g1517 464 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Lja2g1517 464 PANTHER CYTOCHROME P450 26 10 462 - -
Lja2g1517 464 PANTHER CYTOCHROME P450 FAMILY PROTEIN 10 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1517 Lja-Chr2 14891174 14894699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1517 82 464 Cytochrome P450 AT5G38970 69.010 0.0 563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1517 2 14891174 14894699 Lja2g1517 2 14891174 14894699 ECH
Lja2g1517 2 14891174 14894699 Lja1g2735 1 32713441 32717808 PCT