Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1512 ATGGACTCTCTGCTCTTGTTTCGGTTTGTCCTCCCATGCACTCTCCTCTTGCTTCTGCCTTCATCATCAGAAGCTTATGATCCTCTTGACCCAAACGGAAACATCACAATAAGATGGGATATACTAAGCTGGACAGGGGATGGTTATGTTGCTGCGGTAACATTAAACAACTTCCAGCAATATAGACATATCCAAGAACCTGGGTGGTCACTAGGATGGACGTGGGCAAAGAATGAGATAATCTGGCAAATGATAGGAGGGCAAACCACCGAGCAAGGAGACTGCTCAAAATTTAAGGGACAAGTGTCCCCACATTGCTGCAAAAAGGATCCCGTTGCGGTTGATCTGATTCCTGGAGCACCTTACAGTGAGCAGGTTGCAAACTGCTGCAAAGGTGGGGTGCTCACCTCATTGAAACAAGATCCGGCCAATGCTGTTGCCTCATTCCGGGTCGTTGTGGGTAGAGCTGGTACCACAACCAAAAGTGTGAGGTTGCCGAAAAACTTCACCTTCAAATCACCTGGACCAGGATATACATGTGGACCAGCAAGAATTGTGAAACCCACCCGGTTTTTAAGATATGATAAAAGGAGAGTAACCCAAGCAATGATGAGTTGGAATGTGACATGCACATATTCACAATTTCTAGCTGCGAAAGCTCCTACGTGTTGTGTGTCCCTCTCAACTTTCTATAATGATACTATTGTATCTTGCCCAACATGTGCATGTGGCTGCCAATCAGGGAACTGTTTATTTCCAACCCTGGAAATAACGGGCATTACATGCACTAGCCATTCATGCCCAATCCGAGTTCACTGGCATGTGAAGCAAAACTACAAGCAGTACTGGCGAGTGAAGGTGACGATTACTAATTTCAATTACAGGATGAATTATTCTGATTGGAACTTAGTAATCGAACACCCAAACTTCGACAATCTGACCCAGCTTTATAGTTTCAACTACGGGTCATTAATTCCCTATGGGGGGTCAATGAATGATACAGCAATGCTTTGGGGAATTAAGTTCTTCAATGATTTGCTCATGCAAGCTGGCCCTCTTGGTTATGTACAGTCAGACCTGCTTTTTGGAAAGGATAAGTCAACTTTTACTTTTCATGAAGGTTGGGCTTTTCCTCGGAGGATCTATTTCAATGGTGACAATTGTGTGATGCCACCACCTGATGTTTATCCAAGGTTACCGAATGCCGGTTCGCAGCAAAAGGCTTCCCCCTTACTTGCTTTGATGTTAACATTTTGGGTAATCCTGTGGATTGAATGA 1278 0.4444 MDSLLLFRFVLPCTLLLLLPSSSEAYDPLDPNGNITIRWDILSWTGDGYVAAVTLNNFQQYRHIQEPGWSLGWTWAKNEIIWQMIGGQTTEQGDCSKFKGQVSPHCCKKDPVAVDLIPGAPYSEQVANCCKGGVLTSLKQDPANAVASFRVVVGRAGTTTKSVRLPKNFTFKSPGPGYTCGPARIVKPTRFLRYDKRRVTQAMMSWNVTCTYSQFLAAKAPTCCVSLSTFYNDTIVSCPTCACGCQSGNCLFPTLEITGITCTSHSCPIRVHWHVKQNYKQYWRVKVTITNFNYRMNYSDWNLVIEHPNFDNLTQLYSFNYGSLIPYGGSMNDTAMLWGIKFFNDLLMQAGPLGYVQSDLLFGKDKSTFTFHEGWAFPRRIYFNGDNCVMPPPDVYPRLPNAGSQQKASPLLALMLTFWVILWIE* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1512 425 PIRSF COBRA 2 425 IPR006918 GO:0010215|GO:0031225
Lja2g1512 425 PANTHER COBRA-LIKE PROTEIN 21 417 - -
Lja2g1512 425 Pfam COBRA-like protein 49 213 IPR006918 GO:0010215|GO:0031225
Lja2g1512 425 PANTHER PROTEIN COBRA 21 417 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1512 Lja-Chr2 14666500 14668091 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1512 2 422 COBRA Gene Family AT3G02210 66.063 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1512 - - gmx:100783820 657.521