Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1502 ATGGTTCGTCAAACTGATTTAGTTATCATTGGTGTCTCTGTTGGTGTGGCCCTCGGAATTCTGATATCTTGCCTCATATTTTTCGGCATAAGGTGGTACAAGAAACGTGCTCATCTTACACGATCTTCACATGAGCCTAGTCTAACAACTCTTCCCATACGAACAAATGGACTGGGAACAAGCACTGACTTTAGCGCATCTCTCACCAGTTCTATAACCACGCCAAGGTCTGAAAATCTACAAAAAAAATCTGCTTTCTCTTGGTGGAGTCATCAAAACAATGATCAGTTTGCTTCACCATCAGGGATCCCAAAGTATTCTTACAAAGATATTCAAAAGGCGACACAGAATTTCACGACTATCTTGGGACAAGGATCATTCGGTACAGTTTATAAAGCCACAATGCCAACGGGAGAGGTGGTAGCTGTGAAGGTGCTTGCACCCAATTCCAAACAAGGGGAGCATGAATTCCAAACAGAGGTACATCTGCTAGGAAGACTGCATCACCGGAATCTTGTGAATTTGGTTGGATTTTGTGTAGATAAAGGACAGCGCATACTGGTTTATCAGTTCATGAGTAATGGAAGTTTAGCAAATCTTTTATATGGCGAAGAAAAGGAGTTGAGTTGGGACGAAAGGCTGCAAATTGCTATGGATATTTCGCACGGAATAGAATATCTTCATGAAGGGGCAGTCCCACCAGTCATACATCGTGATTTGAAGTCTGCCAACATATTGCTAGATGACTCAATGAGAGCTATGGTTGCTGATTTTGGGCTATCAAAAGAAGAGATCTTTGATGGCCGGAATTCCGGTCTAAAAGGTACATATGGTTACATGGATCCGGCTTACATTTCCACGAGCAAGTTAACAACCAAGAGCGACATATACAGTTTGGGTATCATACTTTTTGAGCTCATCACTGCCATCCACCCTCATCAAAATCTGATGGAATACATTAACCTTGCTGCAATGGATCATGATGGCATAGATGAGATACTTGACAAGCAACTTGTGGGAAAATGCAACCTTGTAGAAGTGAGGCAACTTGCTAAAATTGCACATAAATGCTTGCACAAATCACCTAAGAAACGCCCATCTATAAGTGAAGTTTCTCAGGGTTTATCAAGGATAAAGCAAAGGCGACTGCGCCATGTTATGGAGGATACCTTGTCACTTGCAAGCAATACCTTTTCAAGAGCTGTGAGTCGATTCGAAGATCGACATGTTGAATTAAGTAGGATACCTACCACGAACCTTACAGAAACTGTATGA 1275 0.4188 MVRQTDLVIIGVSVGVALGILISCLIFFGIRWYKKRAHLTRSSHEPSLTTLPIRTNGLGTSTDFSASLTSSITTPRSENLQKKSAFSWWSHQNNDQFASPSGIPKYSYKDIQKATQNFTTILGQGSFGTVYKATMPTGEVVAVKVLAPNSKQGEHEFQTEVHLLGRLHHRNLVNLVGFCVDKGQRILVYQFMSNGSLANLLYGEEKELSWDERLQIAMDISHGIEYLHEGAVPPVIHRDLKSANILLDDSMRAMVADFGLSKEEIFDGRNSGLKGTYGYMDPAYISTSKLTTKSDIYSLGIILFELITAIHPHQNLMEYINLAAMDHDGIDEILDKQLVGKCNLVEVRQLAKIAHKCLHKSPKKRPSISEVSQGLSRIKQRRLRHVMEDTLSLASNTFSRAVSRFEDRHVELSRIPTTNLTETV* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1502 424 ProSiteProfiles Protein kinase domain profile. 116 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1502 424 Pfam Protein kinase domain 120 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1502 424 CDD STKc_IRAK 122 378 - -
Lja2g1502 424 PANTHER OS01G0750732 PROTEIN 9 418 - -
Lja2g1502 424 Gene3D Transferase(Phosphotransferase) domain 1 192 398 - -
Lja2g1502 424 SUPERFAMILY Protein kinase-like (PK-like) 86 373 IPR011009 -
Lja2g1502 424 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 9 418 - -
Lja2g1502 424 Gene3D Phosphorylase Kinase; domain 1 79 191 - -
Lja2g1502 424 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Lja2g1502 424 SMART serkin_6 116 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1502 424 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Lja2g1502 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1502 Lja-Chr2 14569729 14574589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1502 58 371 Receptor kinase-like Gene Family AT3G19300 39.319 1.03e-70 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Lja2g1502 Pkinase 6.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1502 - - gmx:100819995 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1502 2 14569729 14574589 Lja2g1502 2 14569729 14574589 ECH