Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1492 ATGACGACAGGGGGTCTTCCACCTAAGCCAGAGAAGACAAAATCAAGGAGGAACAAGGCTGTTGTTGATGAGAATGCACCTTTGATTCCCAAGACTCAGGAAAATGATGATGCTGGGTATGATGATTTTAATGGAGCTTCATTTTCTGGGGCTGTTTTCAACTTGTCGACCACAATCATTGGTGCTGGGATCATGGGTTTGCCTGCATGTGTGAAAAAGTTGGGGATGGTGCCTGGTCTTCTTGCTATAATCTTAACAGCATTCTTGACAGACAAGTCAATTGAGTTCATGATTAGGTTTTCCAGGGCAGGGAACATTTCTTCTTATGGAAATCTCATGCGAGACGCGTTTGGGAAATTCGGGAAAGCTCTGTCGGAGATAAGTGTTGTAATCAATAACATCGGCGTGCTGATTGTTTACATGATTATTATTGGTGATGTGATTTCTGGAACATCTTCAGGTGGAACTCACCATTCTGGTGTCCTTGAAGGATGGTTTGGGGTCCATTGGTGGACTGGGCGTGCATTTGTTCTTGTTGTTGTAACATTAGCTGTGTTTGCACCTTTGGTCAGCTTTAAGCGAATTGATTCATTGAGATTCACGTCTGCGTTATCAGTTGGACTAGCAATTGTTTTTCTTGTCATTGCTGTGGGAATCTCAATTATCAAGATTATAAGTGGAGGCCTTGAGATGCCCAAACTTTTTCCAATCATTACTGATGCAGCGTCAGTTTTTGAACTATTCACCGTAGTTCCTGTGCTAGTGACTGCTTTTATCTGCCACTACAATGTTCACAGCATAGATAATGAACTTGAAAACTCATCACAAATGCATGGGGTTGTACGTACTTCCCTTGCTCTATGCTCCTCGGTGTACTTACTGACAAGCTTCTTTGGGTTCCTCCTATTTGGTGACGGAACACTTGACGACGTGCTTGCCAATTTTGATACTGATCTTGGAATTCCTTTTGGTTCTGTGCTCAATGACGCTGTTCGTTTTAGCTATGCTGCACATCTTGTGCTTGTGTTTCCAGTAGTCTTCTATGCAGTGCGGGTCAACATAGATGGTCTCTTATTTTCTTCATCAAGGCCTTTGGCTCTAGATAACTTTAGATTTGCATCAATCACTAGTACCCTTGTCGCCATTATCTTCCTGGGAGCAAATTTCATACCCAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACAGCTGCTGTTTGTGTAGGATTCATATTTCCAGCTGCCATCACTCTTAGGGATCGACACAACATTGCAACTAGAACAGACAAGATTCTATCTGTCTTTATGATAATCCTGGCAGTATTGTCAAACGCTGTGGCTATATACAGTGATGCCTATGCCATGACCAAGAAGAAAAAAGCTTAG 1386 0.425 MTTGGLPPKPEKTKSRRNKAVVDENAPLIPKTQENDDAGYDDFNGASFSGAVFNLSTTIIGAGIMGLPACVKKLGMVPGLLAIILTAFLTDKSIEFMIRFSRAGNISSYGNLMRDAFGKFGKALSEISVVINNIGVLIVYMIIIGDVISGTSSGGTHHSGVLEGWFGVHWWTGRAFVLVVVTLAVFAPLVSFKRIDSLRFTSALSVGLAIVFLVIAVGISIIKIISGGLEMPKLFPIITDAASVFELFTVVPVLVTAFICHYNVHSIDNELENSSQMHGVVRTSLALCSSVYLLTSFFGFLLFGDGTLDDVLANFDTDLGIPFGSVLNDAVRFSYAAHLVLVFPVVFYAVRVNIDGLLFSSSRPLALDNFRFASITSTLVAIIFLGANFIPSIWDIFQFTGATAAVCVGFIFPAAITLRDRHNIATRTDKILSVFMIILAVLSNAVAIYSDAYAMTKKKKA* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1492 461 PANTHER AMINO ACID TRANSPORTER 7 459 - -
Lja2g1492 461 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 459 - -
Lja2g1492 461 Pfam Transmembrane amino acid transporter protein 46 450 IPR013057 -
Lja2g1492 461 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1492 Lja-Chr2 14445309 14449660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1492 4 459 Amino Acid or Auxin Permease AAAP Family AT3G30390 66.228 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1492 K14207 - gmx:100791286 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1492 2 14445309 14449660 Lja2g1492 2 14445309 14449660 ECH