LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja2g1470	ATGGTTTCGAGGTCGTATTCTAACTTGTTGGATCTTACTTCATGTGGCTCCCCATCTTTTGGTCGGGAAAGGAAAAGGTTTCCTCGGGTGGCCACTGTTGCTGGTGTTCTGTGTGAGCTAGATGATGATACCAACAGTGCTGGTTCTGATGCTCCCTCTTCCATCTCTCAAGAAAGGATGATCATTGTGGGTAATCAGCTTCCTTTACGAGCTCACAGGAAAGATAATGGCACGTGGGACTTCGCCTGGGATGAGGACTCGCTCCTTTTGCAGTTGAAAGATGGTCTTGGGGAGGATGTGGAAGTTATCTATATTGGTTGTCTCAGGGAAGAAATTGAGCCAAAGGAGCAAGATGATGTTGCTCAGTACTTGCTTGACAATTTCAAATGTGTGCCCACGTTCCTCCCTCCTGATCTTTTTAGTAAATTTTATCATGGATTCTGCAAACAACACCTGTGGCCTTTATTTCACTACATGCTTCCGTTATCACCTGATCTCGGTGGCCGATTTGATAGGTCCCTTTGGCAAGCTTATGTTTCCGTGAACAAGATATTCGCAGACAAAGTGATGGAAGTCATTAGCCCCGATGATGACTTTGTGTGGGTTCATGACTACCATTTGATGGTTCTCCCCACATTTTTGAGAAAGAGGTTTAACAGGATGAGGCTTGGATTCTTCCTTCATAGTCCATTTCCTTCCTCTGAGATATATCGAACACTTCCTGTTAGGGATGAACTTCTCAGAGCTCTTCTGAACTCTGATCTTATTGGGTTTCATACTTTTGATTATGCCAGGCACTTCCTCTCCTGTTGCAGTAGAATGCTTGGGCTTTCTTACCAGTCCAAGCGTGGCTACATTGGTATTGAGTACTATGGTAGAACTGTTAGTATTAAGATTCTTCCTGTTGGCATTCATATTGCACAGCTTCAATCTGTCATGAATCTTCCTGAGACAGAAAGAAAGGTTGCAGAATTACATGATCAGTTCAAAGGACGAACTGTGCTTCTTGGGGTTGATGACATGGATATCTTCAAAGGAATCAGCTTAAAACTTTTAGCTATGGAACAATTGCTTTTACAACATCCTGATAAGAGGGGCGAAGTTGTTCTGGTCCAAATTGCCAACCCTGCAAGAGGCCGGGGGAAGGATGTCCAGGAGGTACAAAGTGAAACTTATGCTACAGCAAAAAGGATAAATGATAAATTTGGAAGGTCTGGATACACACCTGTAATCTTGATTGATACACCACTCCAATTTTATGAGCGAATTGCCTATTATGTGATTGCAGAATGTTGTCTTGTTACAGCAGTGAGAGATGGGATGAACCTTATTCCCTATGAATATATCATATGTAGACAAGGAAATGAGAAGCTAGATGAGATTTTAGGGATTAACACATCTACAGAAAAAAAGAGTATGCTGGTTGTGTCTGAGTTCATTGGGTGCACCCCATCACTAAGTGGGGCAATTCGAGTCAATCCATGGAATATTGATGCTGTTTCTGAAGCTATGGATACTGCCTTAATGGTCCCAGAGTCTGAAAAAAAGATGCGGCATGAGAAGCATTATAGGTATGTTAGCACTCATGATGTTGCATATTGGGCACGTAGCTTCTTGCAGGATCTGGAAAGGGCATGTAAGGATCATCTCAGGAGGAGATGCTGGGGTATTGGTTTTGGTTTAGGATTTCGAGTAATCGCTGTAGACCCAAATTTCAGGAAGTTATCAGTTGATCATATTGTTTCAGCTTATAAGAGGACCAAGCACAGAGCAATTCTATTGGATTATGATAGTACCATGATGCAACCTGGATCAATCAGCACAGCACCAAATTCTGAAGCTGTAAGCATCTTGAACAGCTTGTGCAGGGACACCAAGAATGTTGTTTACATAGTCAGTGCAAAGGAGAGAATGATTCTTACTGAATGGTTTTCTTCTTGTGAAACTCTGGGAATTGGTGCAGAGCATGGTTTTTTTGTGAGGACAAATCGAGATGCAGAATGGGAAACTTGTGTTTCTGTTCCAGATTTTGACTGGAAACAGATTGCTGAGCCAGTAATGCAGTTATACATGGAAACAACCGATGGCTCTAACATAGAGGCCAAAGAGAGTGCTCTCGTTTGGAATTACGAGTACGCTGACCGAGACTTCGGTTCATGCCAGGCTAAGGAGCTTTTAGATCATCTTGAAAGTGTTCTCTCTAATGAGCCTGTTTCTGTTAAAAGTAGTTCAAACGTTGTGGAAGTTAAACCTCAGGGTGTGAACAAGGGCATTGTAGCAGAACATCTTCTCTTAAGGATGCAACAAAAAGGAGTACTCCCGGATTTTGTTTTATGCGTTGGGGACGACAGATCTGATGAGGACATGTTTGAGGTTATAACAAGTGCAAAAGCCTCACTTTCTCCAGTCGCCGAAGTGTTCCCTTGTGCCGTTGGGCAGAAACCTAGTAAGGCCAAGTATTACTTGGAAGACCCAAGTGAGATTCTGAGAATGCTGCAAGGCCTGTCTAATGCTTCTGAAAAGTCTGCTAGAAGTTCTTCCCTGTCTTCTCCTTAA	2556	0.4276	MVSRSYSNLLDLTSCGSPSFGRERKRFPRVATVAGVLCELDDDTNSAGSDAPSSISQERMIIVGNQLPLRAHRKDNGTWDFAWDEDSLLLQLKDGLGEDVEVIYIGCLREEIEPKEQDDVAQYLLDNFKCVPTFLPPDLFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRMRLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGIEYYGRTVSIKILPVGIHIAQLQSVMNLPETERKVAELHDQFKGRTVLLGVDDMDIFKGISLKLLAMEQLLLQHPDKRGEVVLVQIANPARGRGKDVQEVQSETYATAKRINDKFGRSGYTPVILIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDEILGINTSTEKKSMLVVSEFIGCTPSLSGAIRVNPWNIDAVSEAMDTALMVPESEKKMRHEKHYRYVSTHDVAYWARSFLQDLERACKDHLRRRCWGIGFGLGFRVIAVDPNFRKLSVDHIVSAYKRTKHRAILLDYDSTMMQPGSISTAPNSEAVSILNSLCRDTKNVVYIVSAKERMILTEWFSSCETLGIGAEHGFFVRTNRDAEWETCVSVPDFDWKQIAEPVMQLYMETTDGSNIEAKESALVWNYEYADRDFGSCQAKELLDHLESVLSNEPVSVKSSSNVVEVKPQGVNKGIVAEHLLLRMQQKGVLPDFVLCVGDDRSDEDMFEVITSAKASLSPVAEVFPCAVGQKPSKAKYYLEDPSEILRMLQGLSNASEKSARSSSLSSP*	852

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja2g1470	851	CDD	HAD_TPP	591	827	-	-
	Lja2g1470	851	PANTHER	ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6	1	842	-	-
	Lja2g1470	851	PANTHER	TREHALOSE-6-PHOSPHATE SYNTHASE	1	842	IPR001830	GO:0003824\|GO:0005992
	Lja2g1470	851	Gene3D	Glycogen Phosphorylase B;	52	311	-	-
	Lja2g1470	851	CDD	GT20_TPS	59	543	IPR001830	GO:0003824\|GO:0005992
	Lja2g1470	851	Gene3D	-	589	706	IPR023214	-
	Lja2g1470	851	Gene3D	-	715	848	IPR023214	-
	Lja2g1470	851	SUPERFAMILY	HAD-like	590	835	IPR036412	-
	Lja2g1470	851	Pfam	Trehalose-phosphatase	593	826	IPR003337	GO:0003824\|GO:0005992
	Lja2g1470	851	TIGRFAM	HAD-SF-IIB: HAD hydrolase, family IIB	592	793	IPR006379	-
	Lja2g1470	851	TIGRFAM	T6PP: trehalose-phosphatase	588	835	IPR003337	GO:0003824\|GO:0005992
	Lja2g1470	851	Pfam	Glycosyltransferase family 20	59	543	IPR001830	GO:0003824\|GO:0005992
	Lja2g1470	851	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	59	547	-	-
	Lja2g1470	851	Gene3D	Glycogen Phosphorylase B;	312	527	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja2g1470	Lja-Chr2	14238011	14242428	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja2g1470	1	851	Trehalose Biosynthesis Gene Families	AT4G17770	77.480	0.0	1416

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja2g1470	K16055		-	gmx:100782799	1520.75