Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1457 ATGAACATCACCGTGAGCCCTGATTATGCGGCACCAGAGGAGCTATACAGAACAGCACGTTACATGGCTTCTCCGAACATAGTGGGGGAGAGCCTAACTTGGGAGTTCCCCGTTGATGCTGGCTTCTTATACATGCTCAGGCTCCATTTCTGTGAACTTGACCCCAATATCACCCACACCAATGACAGGCTTTTCAACATCTACGTGGCGGGCAAGATTGCAGAGGATGGCGCTGATGTTATGAAATGGACCAGCAATAAAAGAGGGGTTGCTGTTCAAAGAAACTATGCTGTTCAGCTTATTCCAACGAACGATGTTAATCAGAAAAAGATGAATCTCTTGCTCCAGATGAACAGTGACCCCTTTTTGAATGGGCTTGAAATTTTCAAGATCAGCGATGGAGCCTCCAACAACCTAGCCGGACCCAATCCAGACCCGCTTCCGACTCGGCCCAGCCCACAACTTCCTACCACATTTCAACTAGGGGAGCCAGACAAGACTCATCACGTGTCCGCGGTTATAATTGCTCCAGTTTGTGTAGCTTCAGGAGTTGCAGTTTTGATCTTCATAATGTACTATTTTAGAAGGAGATTGCGTAAGGAAGGATCTAAAGCTCATCAAGAGTTTGAGACTTTTCTTAAAAACCATGGACCACTTGCTATAAGAGGATATAGCTACTCTGACATAAAGAAAATGACCAACTCCTTTGTAGAAAAATTAGGCCAAGGAGGATATGGATCTGTTTTTAAAGGGAAGATACATGATGAATGTCTGGTTGCTGTCAAAGTGTTGAATAGCTCAAAAGGCAATGGAGGGGAATTCATAAACGAGGTAGCAAGCATTAGCAGAACATCTCATGTTAACATAGTTACTCTATTAGGATTTTGCTTTGAAGGATCTAAGAGAGCATTGGTATATGAGTTCATGTCTAATGGGTCTCTGGAGAAATTCATATATGAGAAAAATCCAACGGCAGTAGAAAATCAATTGAATTGTGAAACCTTATATCATATTACAATTGGTGTGGCTCGGGGATTGGAATATTTACATAAGGGATGCAACACTCGAATTTTCCATTTTGACATAAAGCCTCACAACATACTGCTGGATGAGAAGTTTTGTCCTAAGATATCAGATTTTGGACTCGCAAAAATCTGTCATGGAAATCAGAGTTTGGTGTCTATGTTGGAAGCTAGAGGAACTCCAGGGTTTATTGCTCCAGAGGTGTTTTCTAGAAATTTCGGAGTGGTGTCTCACAAGTCAGATGTTTATAGTTTTGGGATGATGATTTTAGAAATGGTTGGAGGAAGAAAGAATATCAATGTGGAAGTTGAGTGCTACAGTGAAATATATTTTCCATATTGGATTTACAAGCGTCTGGAAAAAGATCAAGAGCTTTCTCTGCAGTGTATTAAAAATGCAATTGATAGGGAGATGGCAAGGAAGATGATTTTGGTAAGCTTATGGTGCATACAAACAGACCCTTCTGATCGTCCAGCAATGAGTCAAGTGGTGGATATGCTAGAAGGAAGTCTTGAATCGTTGCAAATACCACCAAAACCTTTCTCATCTTCACCAAGAACATCACCAAACCATTACTCAACTTCAAATATGGAGTGTGTCTCTGTCAGTGTCAACATGTGA 1644 0.413 MNITVSPDYAAPEELYRTARYMASPNIVGESLTWEFPVDAGFLYMLRLHFCELDPNITHTNDRLFNIYVAGKIAEDGADVMKWTSNKRGVAVQRNYAVQLIPTNDVNQKKMNLLLQMNSDPFLNGLEIFKISDGASNNLAGPNPDPLPTRPSPQLPTTFQLGEPDKTHHVSAVIIAPVCVASGVAVLIFIMYYFRRRLRKEGSKAHQEFETFLKNHGPLAIRGYSYSDIKKMTNSFVEKLGQGGYGSVFKGKIHDECLVAVKVLNSSKGNGGEFINEVASISRTSHVNIVTLLGFCFEGSKRALVYEFMSNGSLEKFIYEKNPTAVENQLNCETLYHITIGVARGLEYLHKGCNTRIFHFDIKPHNILLDEKFCPKISDFGLAKICHGNQSLVSMLEARGTPGFIAPEVFSRNFGVVSHKSDVYSFGMMILEMVGGRKNINVEVECYSEIYFPYWIYKRLEKDQELSLQCIKNAIDREMARKMILVSLWCIQTDPSDRPAMSQVVDMLEGSLESLQIPPKPFSSSPRTSPNHYSTSNMECVSVSVNM* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1457 547 Gene3D Transferase(Phosphotransferase) domain 1 309 517 - -
Lja2g1457 547 Pfam Protein kinase domain 237 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1457 547 ProSiteProfiles Protein kinase domain profile. 234 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1457 547 Gene3D Phosphorylase Kinase; domain 1 206 308 - -
Lja2g1457 547 PANTHER RUST RESISTANCE KINASE LR10-RELATED 174 537 IPR045874 GO:0004672
Lja2g1457 547 ProSitePatterns Protein kinases ATP-binding region signature. 240 262 IPR017441 GO:0005524
Lja2g1457 547 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 174 537 - -
Lja2g1457 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 357 369 IPR008271 GO:0004672|GO:0006468
Lja2g1457 547 SUPERFAMILY Protein kinase-like (PK-like) 217 509 IPR011009 -
Lja2g1457 547 Pfam Malectin-like domain 6 131 IPR024788 -
Lja2g1457 547 Gene3D - 1 132 - -
Lja2g1457 547 SMART serkin_6 234 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1457 Lja-Chr2 14056424 14059007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1457 6 521 Receptor kinase-like Gene Family AT5G39030 43.017 6.73e-138 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lja2g1457 Pkinase 9.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1457 - - lang:109359375 532.717