Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1447 ATGTCGAAGACGTCTCAATCCCAAGATCCAAGATCAAGCAATCAACAGAGGAACACTCGAAATCCTCCTGGTATTGCATGTTTCTTAATTTGCCTTTTTCACTTTTCATATAATTTTCGTTCATTTACTACACTAACTCCGCTCACATTTGATCTTCGTATTACGATGATCGGTCGTACAGAACCTTCATCACCTCTTTTTGAGGGAGGCATGGGACAACCGTCCAAGGAGTCTGTTATCAACATTGATGTTGGAACATTTGCATCAAATTTAGGAGGGGATGATATGAAGGTGAAGGTCATAGAAATTGGGTCAAAGAATAGTTCTATGAAAGCAAGGACGGCCATAGTGAACTGCAGGAAGTCTCAGGATATTTTAGCAAGTTTAAGACCCTTCGCTAAAGAGGAAGATATGTGTATCGTCGGAGTAGCTGGAACTGTATCACATGTTGAATTTATTAATCGGCAAGGAGCCCCAGTAGATGTTCATAGAGATTTTCAAATTGTCTCACTTGAAGGAAATGTCGTATACCCAAAAGAAAATGGTAAGAACTCGTCAAGCTGGGCAAATGTTATGTTGTCTGGAGAAAATGGTTTTCTAGGAGGACCCGTGAAAAGCTTAATTGCTAAATCACATGTTCAGGTTATTCTTAGTACAGTTGGCATATCAAATATACAGAGCAAGGCAACCGAAGATATGGTAAAAGATGAAAATTTTGCTGTATTTTTGAATCATGTGAATGCTGCGAATGAAATGATGAATAAGGTTTATGAAGAGACCATGAAGGAGCTTAACCAGTCGTGA 804 0.3905 MSKTSQSQDPRSSNQQRNTRNPPGIACFLICLFHFSYNFRSFTTLTPLTFDLRITMIGRTEPSSPLFEGGMGQPSKESVINIDVGTFASNLGGDDMKVKVIEIGSKNSSMKARTAIVNCRKSQDILASLRPFAKEEDMCIVGVAGTVSHVEFINRQGAPVDVHRDFQIVSLEGNVVYPKENGKNSSSWANVMLSGENGFLGGPVKSLIAKSHVQVILSTVGISNIQSKATEDMVKDENFAVFLNHVNAANEMMNKVYEETMKELNQS* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1447 267 Gene3D - 112 238 - -
Lja2g1447 267 SUPERFAMILY AF0104/ALDC/Ptd012-like 113 219 - -
Lja2g1447 267 MobiDBLite consensus disorder prediction 1 20 - -
Lja2g1447 267 Pfam Plants and Prokaryotes Conserved (PCC) domain 114 219 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1447 Lja-Chr2 13897584 13900106 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1447 76 219 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 28.758 8.19e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1447 - K01439 lja:Lj2g3v1588540.1 171.4