Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1441 ATGGGGGATTTCAATGGATCTGCATGTTACAATGTATCTTTGCTTCATCCCAATCGAATCTGGCAAACAGCTAGTGTTGTAAAATCAGAGCTCCCTGTTCTCGCCTTTCAAATTATCTTCATTGCGCTCCTGTCTAGACTTTTCTTCTTTATCTATAAACCCCTCCTACAACCTCGTCTTCTTTCTCAAATCTCTGTTGGTTTCATTCTTACCAAACCATTCATTGGGAATTACGGACATGTTTTTCAATACATTTATCCGGTTGCTGGCGTTATCAATATTGAAGTGCTGACACACATTGGCCTAATATTCTATGCGTTCCTTTGTGGCCTGGAGATGAACCTAAATGCCATTCTACGAGCTGATAAAAAGTCCAAGGGCATCGCCATTGCTGGGATCGCCTTTCCCATGGTGATGGCACCGGCCTTATATGCCCTGCATCGAAAAGTTTATGTCACTACTTCTACCAACAAACTTGAAGATCACACAACTTATGCTTATTTACTTTGGACTCTCATTATCACCGTAACAGGTTTTCCACTCGTAGTTCAATCCCTTTCTGATCTCAAGCTCCTTTATACGGGTCTCGGCAGAATCGCTTTAACAACAACCATGATTAGTGACACCTATGCATGGATTCTTTTCACATTGGTGCTTCCATTTTGTACTAATTTTGACGGAGCAATATACTCAGTGATGTGCACCATAGTATTCATTGTTGTTTCCATCTTTGTGCTACATCCTATATTGGAAAAGTTTATCAATAACAAGACAGAAAAGGATGACTGGCATGATGGCCAATTAATCTTTGTGGTAATGGGGGTCTTAGCTTTTGCATACTTAACAGATCTGCTTGGTACGCATGGGATTGTTGGGGCTTTTGTGTATGGACTCATTCTACCTCATGGTAGATTTTCTGACATGGTGATGTCAGTTTCAGATGATTTTAGTACTGGGTTTCTGGCACCAATCTACTTCGCTGGAACTGGAATGAAACTCACATTATCAACTATTTTTGAACAATCAAATTGGCACTTGACATTGCTAGTTGTACTTTTGCTGTGTGTTCCAAAGATAATAAGCACTATGTTGACCGGTTTCTTCTTCGGCATGAGCAACCGAGAAGGTTTAGCACTGGGCTTGATTATGAATACCAAGGGTGCCATGGCACTAATCATGCTAAACATTGCTTGGGATAGAGGGATATTTTCTCCAGCAACATATACTGTAATTACCTCTGCTGTTCTCCTAATGACTGTAGTAGTATATCCAATCATCAACATCATCTACAAGCCCAGAAAGAGATTTGAGAAGAACAGGCTAAAGACAATAGAAAAGATAAGAGCTGATGCAGAGCTTCGAATTCTAGCGTGTGTCCACAATACGCGCCAAGCTACCAGTATGATCAACATAATTGAATACTTTAATGCCACAAGAGTTTCCCCCGTACAAGTTTTTGCAGTCTACCTTGTTGAACTTACCAGACGCGGTGCTGCACTTGTTGCTGCGCACATGGAGAAGCCTAGTCACCATCACCGAGTGCAAAACCTGACCACAACACAGAGAGAATTAGAGAACATTACTAACATCTTCGAAGCATTCAGAGAGGAACATGATGCTGCAAGAGTCTGGACCTCAAGTGTCATGTCAGACTACGACACCATTCATGAGGACATACATGACACAGCAAATGAGAAACACACAAGCCTGATTCTCCTTCCGTTCCACAAACATTTCACTTTACAAGGGGTGTTAGAAACAACGAGTCTAGCATATAGAGATATAAATCAAAAGGTAATGCAATATGCACCTTGTTCTGTGGGAATCTATGTTGATCGCAGTGCCGGGAAGTTACAGAAAAAAAACTTCCACATTTTCATGCTCTTTGTTGGTGGTCCTCATGATCGTGAAGCCATGGCTGTTGCAAAGAGGATGACGGGGAAAGCTGGAGTCGCGCTAACGGTGGTTCGATTCATCTTGCTTGATGAACTGGCAGAGGTGGATACTAAAAGTTACCCTAAAGCGCAAGGGTTGTTATCCTCTGTGATGGACAGTGAGAAACAAAAAGAGTTAGATGATAAGTATGTGAGTTCATTCAGACTCAAGGTAGTGAATATGAATGATGATTCTATATCCTACTCAGAGATTGGTGTACATTCTATTGGTGATATCAACAAAGTTCTGAGTGAGATTGAAAACAATGGTTGCGATTTATACATAGTTGGACAAGGGAACGGTAGGAACTCTCGTGTGTTATCAGATCTATTGAAGTGGTGTGATTACCCAGAACTTGGAGTTATGGGCGATATTATAGCGTCAAAGGATATCGTTTCACGCTCTTCTTTGTTGGTTGTGCAACAATATGGGTATGGAGGAATGACTTTTGGAAAAGATCTCAACCTTGTGACAAATAATCATGAGGTTTGA 2427 0.4116 MGDFNGSACYNVSLLHPNRIWQTASVVKSELPVLAFQIIFIALLSRLFFFIYKPLLQPRLLSQISVGFILTKPFIGNYGHVFQYIYPVAGVINIEVLTHIGLIFYAFLCGLEMNLNAILRADKKSKGIAIAGIAFPMVMAPALYALHRKVYVTTSTNKLEDHTTYAYLLWTLIITVTGFPLVVQSLSDLKLLYTGLGRIALTTTMISDTYAWILFTLVLPFCTNFDGAIYSVMCTIVFIVVSIFVLHPILEKFINNKTEKDDWHDGQLIFVVMGVLAFAYLTDLLGTHGIVGAFVYGLILPHGRFSDMVMSVSDDFSTGFLAPIYFAGTGMKLTLSTIFEQSNWHLTLLVVLLLCVPKIISTMLTGFFFGMSNREGLALGLIMNTKGAMALIMLNIAWDRGIFSPATYTVITSAVLLMTVVVYPIINIIYKPRKRFEKNRLKTIEKIRADAELRILACVHNTRQATSMINIIEYFNATRVSPVQVFAVYLVELTRRGAALVAAHMEKPSHHHRVQNLTTTQRELENITNIFEAFREEHDAARVWTSSVMSDYDTIHEDIHDTANEKHTSLILLPFHKHFTLQGVLETTSLAYRDINQKVMQYAPCSVGIYVDRSAGKLQKKNFHIFMLFVGGPHDREAMAVAKRMTGKAGVALTVVRFILLDELAEVDTKSYPKAQGLLSSVMDSEKQKELDDKYVSSFRLKVVNMNDDSISYSEIGVHSIGDINKVLSEIENNGCDLYIVGQGNGRNSRVLSDLLKWCDYPELGVMGDIIASKDIVSRSSLLVVQQYGYGGMTFGKDLNLVTNNHEV* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1441 808 Gene3D - 453 759 - -
Lja2g1441 808 Pfam Sodium/hydrogen exchanger family 37 421 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja2g1441 808 PANTHER CATION/H + ANTIPORTER 8 799 - -
Lja2g1441 808 PANTHER CATION/H+ EXCHANGER 3 8 799 - -
Lja2g1441 808 Coils Coil 517 537 - -
Lja2g1441 808 Gene3D - 33 439 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1441 Lja-Chr2 13843041 13846003 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1441 9 788 Antiporter Super Family AT2G13620 34.470 1.42e-161 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1441 - - gmx:100804266 1076.23