Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1324 ATGGTTCCTTTTCCCAGTGAGATCAGAGGAGTTCAGTATCTAACACCAGAGAACCAATTCCTTGCTCCACCAAATTTTGGATTACAGCAGAGTGATGACATCCCAAACCTTTATCTTAATAGCCTCTTAAGCACCTTGCCAAACTGCCAGTTCCCATCTTTAGGCAATGAATTTGCTCCTCCTAATCCATGCCTCAGCAGCAACTCAACAACTTCTGACGAAGCAGATGAGCTTCAGTTCAGAGTAATCGACGAAAGGAAGCACCGGCGAATGATATCGAACCGAGAATCCGCCCGCAGATCAAGGATGAGGAAGCAGAAGCACTTGGATGAACTCTGGTCCCAGGTAGTCAGGCTCAGAACTGAGAATCACAACCTTGTTGATAGACTCAACCATGTGTCTGAGTCCCATGACAGAGCTCTTCAAGAGAATGCACGCCTCAAGGAAGAAACTTCTGATCTTCGCCGAATGGTAGCAGACATGCAAATTGGAAACTCTTTTGCTTGCACCATGAGAGATTTTGAGGAAATTCCATGCAACACATCTCAACTTAAAGAGGATTCCTCAAACCAATCAATCATTCCTTCAGACTTGGTTCATGAATGA 606 0.4488 MVPFPSEIRGVQYLTPENQFLAPPNFGLQQSDDIPNLYLNSLLSTLPNCQFPSLGNEFAPPNPCLSSNSTTSDEADELQFRVIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLVDRLNHVSESHDRALQENARLKEETSDLRRMVADMQIGNSFACTMRDFEEIPCNTSQLKEDSSNQSIIPSDLVHE* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1324 201 Gene3D - 84 139 - -
Lja2g1324 201 PANTHER BZIP PROTEIN (ATBZIP48) 5 193 - -
Lja2g1324 201 MobiDBLite consensus disorder prediction 182 201 - -
Lja2g1324 201 CDD bZIP_plant_GBF1 87 138 IPR045314 GO:0003700|GO:0006355
Lja2g1324 201 SUPERFAMILY Leucine zipper domain 86 135 IPR046347 GO:0003700|GO:0006355
Lja2g1324 201 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 89 104 IPR004827 GO:0003700|GO:0006355
Lja2g1324 201 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 84 147 IPR004827 GO:0003700|GO:0006355
Lja2g1324 201 SMART brlzneu 82 146 IPR004827 GO:0003700|GO:0006355
Lja2g1324 201 Coils Coil 130 157 - -
Lja2g1324 201 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 5 193 IPR044521 -
Lja2g1324 201 Pfam bZIP transcription factor 86 144 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1324 Lja-Chr2 12678041 12679016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1324 48 174 bZIP Transcription Factor Family AT3G30530 61.194 1.85e-47 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja2g1324 bZIP_1 3.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1324 - - gmx:778126 313.538