Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1322 ATGGCGAGTAATAACTCCTCCAAACTCGCAGCGGTTGTTATCATCTCGGCGTTGCTATTAGCGGCGTTGCCGGTGCCGGCGAGGGGAGAACAAGAATGCTCCTCCAAGCACGAAGGAAAGTGCCATGACAAGAACAAGGCATTGAAGCTGAAAATCATCGCCATCTTCTGCATTCTGGTAACCAGCATGCTAGGCATCTGCCTCCCAATCTTCTCCGGCGCCGTCCCCGCCTTGAATCCAAACGGCGACCTCTTCGCCATCGTAAAAGCCTTCGCCTCCGGCGTCATACTCGCCACCGGTTACATGCATGTTTTGCCTGACTCGTTTGACGACCTCACCTCGCCGTGCTTGCCGGAACGCCCCTGGCACAAGTTCCCCTTCACCACGTTTGTTGCTATGCTCTCCGCTGTTTTTACTCTCATGGTTGATTCCTTCTCCATCAGCTTCTTCAAGAAGAAGCTTTCTGCCGTGTCGTCGGAAGGTGGTGATCCTCGTGAGCCCAAGGAATTGGAAAACGTTGGCGGTTATGATCATCATCATGCACATGGAATGCTTGTGACGACGGGTGTAAATGCAGAACAGTTGCTCCGCCACCGGGTTGTGGCTCAGGTGTTGGAGCTAGGCATTGTGGTGCACTCAGTGGTGATTGGTTTGTCAATGGGAGCTTCTGAGAATCCATGCACAATTAGGCCTCTGATGGCAGCACTTTGCTTCCATCAACTCTTTGAGGGAATGGGATTGGGTGGTTCGATTATGATATTCTTCTTCTCCGTGACGACGCCATTTGGGATTGTGTTGGGGATTGGTTTGTCGAAGGTGTACAGCGATACTAGTCCGACTTCTCTGATCGTGGAGGGGATTCTGAACGCGGTGTCCGCGGGGCTTCTGAATTATATGGCGCTGGTGGATTTGCTGGCTGCAGATTTCATGGGGCCTAAGTTGCAGAGCAGAGTGAGGCTTCAGTTGTGGGCGTTCGTGGCGGTTTTACTTGGGGCAGGGGGCATGTCTGTGATGGCAATTTGGGCATAG 1029 0.5277 MASNNSSKLAAVVIISALLLAALPVPARGEQECSSKHEGKCHDKNKALKLKIIAIFCILVTSMLGICLPIFSGAVPALNPNGDLFAIVKAFASGVILATGYMHVLPDSFDDLTSPCLPERPWHKFPFTTFVAMLSAVFTLMVDSFSISFFKKKLSAVSSEGGDPREPKELENVGGYDHHHAHGMLVTTGVNAEQLLRHRVVAQVLELGIVVHSVVIGLSMGASENPCTIRPLMAALCFHQLFEGMGLGGSIMIFFFSVTTPFGIVLGIGLSKVYSDTSPTSLIVEGILNAVSAGLLNYMALVDLLAADFMGPKLQSRVRLQLWAFVAVLLGAGGMSVMAIWA* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1322 342 PANTHER ZINC/IRON TRANSPORTER 28 342 - -
Lja2g1322 342 PANTHER ZINC TRANSPORTER 7 28 342 - -
Lja2g1322 342 Pfam ZIP Zinc transporter 49 339 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lja2g1322 342 TIGRFAM zip: ZIP zinc/iron transport family 33 342 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1322 Lja-Chr2 12646464 12647988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1322 27 342 Inorganic Solute Cotransporters AT1G31260 56.380 2.44e-127 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1322 K14709 - gmx:100784872 442.965