Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1298 ATGGCTTCCCTCTCTCCGAGACGGAGGAAGATCGTATTGCAAAAATGGAACTTGCTAACTATGAGATGCCAAAGGCCTTTTTCTGAAGCTGGTGATGAAGTCAATGTTCATTATACTGGAACATTGCTTGATGGCACCAAATTTGATTCCAGCAGACATAGGAGAATCCCTTTCAATTTCACTCTTGGACAAGTAGACTGA 201 0.4229 MASLSPRRRKIVLQKWNLLTMRCQRPFSEAGDEVNVHYTGTLLDGTKFDSSRHRRIPFNFTLGQVD* 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1298 66 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 29 64 IPR001179 GO:0003755
Lja2g1298 66 PANTHER PEPTIDYLPROLYL ISOMERASE 26 64 - -
Lja2g1298 66 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 31 66 IPR001179 GO:0003755
Lja2g1298 66 Gene3D - 13 66 IPR046357 GO:0003755
Lja2g1298 66 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 26 64 - -
Lja2g1298 66 SUPERFAMILY FKBP-like 26 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1298 Lja-Chr2 12439514 12440865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1298 29 64 Calmodulin-binding Proteins AT3G25230 83.333 1.03e-15 67.4