Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1281 ATGAAGGAAACTCACATAATATTAGAGTCATGTGGGATTTTCATTACCTTTGTCCTGCATCTCTTGTTCTTCTTCTCCTTCTTTTTTCATCTAGCCACTTGTGATTCAATCAATGTCCCTTCAGATAAAATCCTCCTAAACTGTGGTTCTTCTGGAGCATCCCCATTCAATGGTGTAAACTGGATAGGAGATGTTGACTCAAGTTTCTTGCCTCCACCACATGACACAAATTCATCTACACTCTTGGTCTCAAACACAGCCTCTAAAGTACCAAAAGTTCCATACTCAACAGCTAGAATCATTCACTCGTCTTTCACCTACTCATTCCCCTTCTCTCCTGGCCTTAAATTCATTCGTATCTACTTCCTTTCATCTTCATATTTGATGAAAGACCCTTCCAAGGCTTATTTCTCTGTTAAAGCTGGTCCTTACACCCTTGTTAGTAATTTCAATCCATCTCTTGCAGCAAAAGAGGTCAACTCAGTTTACTTCACCAAGGATTTCTTTGTCTATGTCAGGGAAGAGAAACTCAACATTACCTTCACTCCATCTCCTCTAATTTCCAATGCATTTGCCTTTATAAATGGTATTGAGATCTTCTCAGTGCCATCCAGTATATACTTTCAAGGCTCCAAATCCAAGGTTCCTGTTCCTTACCTTGGACACCATGAACCATTGTTTATTAGTGATGATGAATATGCTCTTGAGATGCTTCACCGTGTTAACATAGGTGTTGATCATTCCGGCGTTGATGTGGAAAATGCTTTCGGGTTATGGTTGGATGATGGAAGCTACATATCTAGCTTACAACATGGAAGTGTCATCAGTATAAGTACCCGTCCAGTTCAGATGAACTACACCACTTATTCCACTTCAAATTATAAATTTTCAGCACCAGAACAGCTATATAGGACTGCAAGGACAATGGGTAGCAATGGAGACACCAACCCGGGATACAACTTGACATGGTCATTCCCTGTTGATTCTGGATTCAAATACCTTGTCAGGCTTCATTTCTGTGAGATTTACCTAGAGGTAACAGAGGCTAATCAGAGGGTGTTCAAGGTGTACATAAACAACCAAACAGCAGAGGAAAAGATGGACATAGTTGCTATGGCTGGAGGGAAATTTACGCCTTTGCACAGAGACTATGTTGTTATGGTTCCTATGGAAAGTGGGAGAAGAAAGCAAGATATGTGGATTGCAATTCACCCCAACTTGAAGTATAAACCAAAATATGCTGATGCCTTGTTGAATGGGGTTGAGATCATCAAGCTAAGCGATAGCAATTATAGTCTTGCAGCAAGTTTCCAACTGAAGAAGGAACAAAAGGAGAAGAAATATAGTGGAAATTTTCGGCTACTTCCATTTGATTCTCCTGAAAGAAGTCTCAGAAATATTCAGCATCATGTAACAGTGACTTCATGTTCTTGCTATCAATTCACATTGGCAGAGATAAGCACAGTCACTAACAACTTCAGTGATGCTCTTGTCATTGGGGAGGGAGGGTTTGGAAAGGTTTACAAAGGCACCATGCCAAATGGGGTTACTGATTTAGCAATAAAGCGCTCTAAGCCTAGTTCTCGCCAAGGGTTTAAGGAGTTTCAAAATGAGATCAATTTTTTCTCATTTTCTCACATGAACCTAGTGGCATTGCTGGGGTACTGCCAAGAGGGGAATGAACTTATACTTGTGTATGAATACATGGCTCATGGTTCTCTCTGTGAACATCTTTACAAGAAGAAACAAAACCAATCACTGAATTGGATGCAAAGACTCAAGATTTGTGTTGGTGCAGCTCGAGGTTTACATTACCTCCACACAGGCACAGGGGAACCAGTGATTCACCGTGACATTAAGTCAGCAAACATATTATTGGATCAGAATTGGGTGCCTAAGATTGCAGATTTTGGGTTATCTAGAATAGTTCCCTCAATTTACCACACTCATGTTAGCACAGAGGTTAAAGGCACTTTTGGATATTTAGACCCTGAGTACTACAAGAGGAAAAAACTGACTCAAAAATCTGATGTCTATTCATTTGGAGTGGTTATGTTTGAATGGGCCTTGCATTGTTACCAATCTGGAACCGTTGATCGATTGGTTGACAAGGATTTAGAAGGAAAGATCAGGTCAGAATGGCTAATGGAGTTTGTGGACATTGGCATCAAGTGCTTGAGTAACAAGGGGGCAGAAAGGCCAACTATGGGAGAGGTGCTTGGTAATTTGGAGAAGATCCTTTCCTGGCAAGAGAGCCTTGAGGAACAAGAAATCAATGCAAGTCCATTCGGCAGTTATGTTCCCTCAGAGAACATAGTTCTAAACTGTGGCTCCAGCACATCTGGACTTCTAGAATATGATGGAAGAAACTGGACCGCTCCTTCAACTCAATCTATTCCTGAAGTTCCCTACATGACTGCTAGGATCTTTCAGTCTCAATTCACCTACACATTCAATGTAACTCCAGGTCCTAAATTCATTCGCCTGCACTTCTACCCAGCTTCCTACTTAGATTTCAATGTCTCCAATGCTTTTTTATCAGTCACTGCTGGTAACTTCACTCTTCTCCATAACTTCAGTGTTTCCCTCAATGCTGATTACCTCAACTTAGCATATTTCATGAAAGAATTCATTGTCCATGTAAGTGGGAGCAGTTTGGAACTTACTTTCACAGCATCATCTAATGCTTCTGATGCCTATGCATTTGTGAATGGGATTGAAGTTGTTTCAATGCCCCTTGGTTTGTACATTCGTGGTGATGATGCCAATCTTCCTTTAGTTGGCCACTACCCCAAATTGTTGTACCTTTATAATGATTCTGCCATGGAAAATTTATACAGATTGAATGTAGGAGGTGAGCGAATTCTACCTAAATATGATACCGGGATGTTTCGCACTTGGGATACTGATTCTGGTTACACATTTGGGGCTTTTGGGATTCAACCCTATAACATGACCATGCCAATTGTGTACACAGATGATATTCCAGCATATACTGCCCCGGAAAACGTCTACCGCACATCACGTTCAATGGCTACCTTTGAGAATGGCCTTGTTAATTTAAATTACAATCAAACATGGCTTTTCCCTGTTGATTCTGGCTTCAATTATCTATTTGATCCAATTGCCCTGAGTGGAGGGCCTGGAGTTGCATTGTACCAAGACTATGTTGTGACGGTTCCTCAAGATAATGAGGCAAATCAGGATCTGTGGCTAGATCTGCACCCTTACAAGTATTCTAAACCTATGTACTACAATGCTTTCTTGAATGGTGTGGAGATTTTTAAACTGAGCAGGTTTGATAAGAAGAGTCTTGCAGGGCTTAACCCTTCCCAAAGGAAGTTTGGATCAGCTGAAAAAAATGCTCCTCATGCTGCAAAATTAAGAAACTCAAAGAAACTCATATTCATCCTTGTTGGAGTTTCACTACCAATTATCCTGTTCTTAGTTCTATGCAGGTTGAAGGTGATTAGGCCTAGAAGAATCATATCATGGTTTGGTCATGTTGCACTTCCACCTAATCAAATTGAAAACAAGTCATCATTTTCATTGAGAGCGATAAAAGTGGCAACAAAGGACTTTGATGAGGCTCTACTTATAGGCACAGGTGGATTTGGCAGTGTCTACAAGGGTAGCTTTGATGGTGGGGTAACTTCTGTAGCCATAAAACGTGCCAATCCAATGTCAGAACAAGGTGATATGGAGTTTGAGACAGAGATTAAATTGCTCTCGCAGCTCCGGCATAGCAACCTAGTCTCACTTTTGGGTTACTGCAATGAAGATGGGGAGATGATATTGGTCTATGACTTCATGGCTCATGGAAGTCTCTATGATCATCTTCATTTGAGGCAGAGGGATCAAGATCAACCCCCTTTGTCATGGATTCAACGTCTTGAGATATGCATTGGAGTTGCAAGAGGTTTGCATTACCTGCACACTGGCACACAGCAAAGGATCATTCACCGCGACATCAAGACAACAAACATACTCTTAGATCAAAATTGGGTGGCCAAAATATCAGATTTTGGGGTGTCAAAGTCAAGCTACAATTCCTTAAGCACCGCCAATATCAAGGGTACCATTGGTTACCTAGATCCAGAGTACTATCAGTGCAACAAGTTGACTGAGAAATCTGATTTATACTCACTTGGGGTGGTGTTATTGGAGGTGCTGAGTGCCAGGCCTGCTATAGTTCCTGGTGAAGATGATGATGAGTGTGCAAACTTGGCTGAATGGGTTGTGTTCTGCTTTGAGAATGGGAATGTAGAGCAAATAGTGGACTCCAACTTAGAAGGAAACATAGTGAAGGAGTGCTTTGAGCTGTATATAGAAGTTGCAATGAAATGTGTAGCAAATAGAGGGGTGGAGAGGCCATCCATTGGTGAGGTGCTAGTGAAACTTGTTCAGGCATTGCAACTTCAGAAAAATTCAGGTACTGGTGTACATAGGAATGATAACACTGGTTTGCTGGGGTATTCAGAATTGACACCTGGTGTTGAGTTCTCTGATATCATGATGCCTGTTGGCAGATGA 4533 0.413 MKETHIILESCGIFITFVLHLLFFFSFFFHLATCDSINVPSDKILLNCGSSGASPFNGVNWIGDVDSSFLPPPHDTNSSTLLVSNTASKVPKVPYSTARIIHSSFTYSFPFSPGLKFIRIYFLSSSYLMKDPSKAYFSVKAGPYTLVSNFNPSLAAKEVNSVYFTKDFFVYVREEKLNITFTPSPLISNAFAFINGIEIFSVPSSIYFQGSKSKVPVPYLGHHEPLFISDDEYALEMLHRVNIGVDHSGVDVENAFGLWLDDGSYISSLQHGSVISISTRPVQMNYTTYSTSNYKFSAPEQLYRTARTMGSNGDTNPGYNLTWSFPVDSGFKYLVRLHFCEIYLEVTEANQRVFKVYINNQTAEEKMDIVAMAGGKFTPLHRDYVVMVPMESGRRKQDMWIAIHPNLKYKPKYADALLNGVEIIKLSDSNYSLAASFQLKKEQKEKKYSGNFRLLPFDSPERSLRNIQHHVTVTSCSCYQFTLAEISTVTNNFSDALVIGEGGFGKVYKGTMPNGVTDLAIKRSKPSSRQGFKEFQNEINFFSFSHMNLVALLGYCQEGNELILVYEYMAHGSLCEHLYKKKQNQSLNWMQRLKICVGAARGLHYLHTGTGEPVIHRDIKSANILLDQNWVPKIADFGLSRIVPSIYHTHVSTEVKGTFGYLDPEYYKRKKLTQKSDVYSFGVVMFEWALHCYQSGTVDRLVDKDLEGKIRSEWLMEFVDIGIKCLSNKGAERPTMGEVLGNLEKILSWQESLEEQEINASPFGSYVPSENIVLNCGSSTSGLLEYDGRNWTAPSTQSIPEVPYMTARIFQSQFTYTFNVTPGPKFIRLHFYPASYLDFNVSNAFLSVTAGNFTLLHNFSVSLNADYLNLAYFMKEFIVHVSGSSLELTFTASSNASDAYAFVNGIEVVSMPLGLYIRGDDANLPLVGHYPKLLYLYNDSAMENLYRLNVGGERILPKYDTGMFRTWDTDSGYTFGAFGIQPYNMTMPIVYTDDIPAYTAPENVYRTSRSMATFENGLVNLNYNQTWLFPVDSGFNYLFDPIALSGGPGVALYQDYVVTVPQDNEANQDLWLDLHPYKYSKPMYYNAFLNGVEIFKLSRFDKKSLAGLNPSQRKFGSAEKNAPHAAKLRNSKKLIFILVGVSLPIILFLVLCRLKVIRPRRIISWFGHVALPPNQIENKSSFSLRAIKVATKDFDEALLIGTGGFGSVYKGSFDGGVTSVAIKRANPMSEQGDMEFETEIKLLSQLRHSNLVSLLGYCNEDGEMILVYDFMAHGSLYDHLHLRQRDQDQPPLSWIQRLEICIGVARGLHYLHTGTQQRIIHRDIKTTNILLDQNWVAKISDFGVSKSSYNSLSTANIKGTIGYLDPEYYQCNKLTEKSDLYSLGVVLLEVLSARPAIVPGEDDDECANLAEWVVFCFENGNVEQIVDSNLEGNIVKECFELYIEVAMKCVANRGVERPSIGEVLVKLVQALQLQKNSGTGVHRNDNTGLLGYSELTPGVEFSDIMMPVGR* 1511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1281 1510 CDD STKc_IRAK 1200 1467 - -
Lja2g1281 1510 Pfam Malectin-like domain 796 1037 IPR024788 -
Lja2g1281 1510 Pfam Malectin-like domain 46 425 IPR024788 -
Lja2g1281 1510 PANTHER FERONIA RECEPTOR-LIKE KINASE 39 431 - -
Lja2g1281 1510 SUPERFAMILY Protein kinase-like (PK-like) 466 742 IPR011009 -
Lja2g1281 1510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1319 1331 IPR008271 GO:0004672|GO:0006468
Lja2g1281 1510 ProSitePatterns Protein kinases ATP-binding region signature. 499 522 IPR017441 GO:0005524
Lja2g1281 1510 ProSitePatterns Protein kinases ATP-binding region signature. 1200 1223 IPR017441 GO:0005524
Lja2g1281 1510 Gene3D Transferase(Phosphotransferase) domain 1 1271 1487 - -
Lja2g1281 1510 Gene3D Transferase(Phosphotransferase) domain 1 569 764 - -
Lja2g1281 1510 CDD STKc_IRAK 499 746 - -
Lja2g1281 1510 PANTHER OS07G0166700 PROTEIN 39 431 IPR045272 GO:0004714|GO:0006468
Lja2g1281 1510 Pfam Protein tyrosine and serine/threonine kinase 498 741 IPR001245 GO:0004672|GO:0006468
Lja2g1281 1510 Gene3D Phosphorylase Kinase; domain 1 458 568 - -
Lja2g1281 1510 Gene3D Phosphorylase Kinase; domain 1 1170 1270 - -
Lja2g1281 1510 SMART serkin_6 1194 1471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1281 1510 SMART serkin_6 493 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1281 1510 SUPERFAMILY Protein kinase-like (PK-like) 1175 1467 IPR011009 -
Lja2g1281 1510 Gene3D - 233 426 - -
Lja2g1281 1510 Gene3D - 940 1038 - -
Lja2g1281 1510 Gene3D - 770 912 - -
Lja2g1281 1510 Gene3D - 44 202 - -
Lja2g1281 1510 PANTHER OS07G0166700 PROTEIN 794 1038 IPR045272 GO:0004714|GO:0006468
Lja2g1281 1510 PANTHER OS07G0166700 PROTEIN 1042 1510 IPR045272 GO:0004714|GO:0006468
Lja2g1281 1510 PANTHER OS07G0166700 PROTEIN 472 750 IPR045272 GO:0004714|GO:0006468
Lja2g1281 1510 PANTHER FERONIA RECEPTOR-LIKE KINASE 794 1038 - -
Lja2g1281 1510 PANTHER FERONIA RECEPTOR-LIKE KINASE 1042 1510 - -
Lja2g1281 1510 Pfam Protein kinase domain 1199 1464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1281 1510 ProSiteProfiles Protein kinase domain profile. 493 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1281 1510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Lja2g1281 1510 ProSiteProfiles Protein kinase domain profile. 1194 1471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1281 1510 PANTHER FERONIA RECEPTOR-LIKE KINASE 472 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1281 Lja-Chr2 12225198 12231303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1281 478 755 Receptor kinase-like Gene Family AT3G51550 54.333 1.05e-100 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lja2g1281 Malectin_like 3.2e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1281 - - lja:Lj2g3v1226740.1 1516.9